Gene Daci_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2672 
Symbol 
ID5748248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2940968 
End bp2942506 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content52% 
IMG OID641297767 
Productintegrase catalytic region 
Protein accessionYP_001563695 
Protein GI160898113 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.226674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCAT ACGCAGACAG GATTCGTGCA GTTGCGCTTT ACATCAAGCT TGGCTTGCGT 
GTCAGAGCCA CGATTCGCCA GTTGGGGTAC CCAACCAAGA ACGCATTGAA AGGCTGGTAT
CAGCACTACC TGAAGCATCA GGATTTGCCA GCAAGCCAAG CTCCAAGAGC ACCAAAATAT
TCGCTGCAGC AAAGGCAGGT GGCTATTGCT CATTACCTCG CCCATGATCG CTGTATTGCT
GCAACGATGA GGGCTTTGGG TTATCCGGGT CGAGGAACGT TGACTGCGTG GGTTCGGCAA
GACTGCCCTG ACACCTGCAA ATCGAGAGTA GGCAGATCTT GGCCGGCTAC AAAGCCTGAT
GCCTTGATGT GTGAGGGCGT GGTGCAGCTG TGTGCCCGTC GATCAAGTGC ACAGCAGATT
GCGGACAAGT TAGGGGTGTG TAGGGGGACC TTGTACAACT GGAAAAATCA GTTGCTTGGC
CCTTGTGCCC CAGCCTCAAT GAAACACAGT CCAAAGCGAT CGCCAGTGTT GGATGAAGCA
GCACTCAGGC GCCAAGTTGA ATCATTGCGC CAGGATGTTC GGCGGCTGAA GATAGAACGT
GAGCTTCTCA AGCAGGCCCA TGAAATCTTA AAAAATGGGG CTGACATTGA TCTGCATAGG
CTGGCAAACA AAGATAAGGC TGTGCTGGTT GAAGCGTTGC ACGGGCAGTA TGAATTGCCA
GAACTGCTTT CTCTTGTTGG CCTTGCTAGA AGCTCGTATT TTTACCATCG TGCTCGGCTG
AAGCTGGCTG ACAAATACGT TGATTTACGC CGAAGCATCA CAGAGATCTT CGACAACAAC
TACCGTTGCT ATGGATATCG CAGGGTGCAG GCATCTCTGC TCAAGGAGTG CACGGGCATC
TCAGAGAAGG TGGTTCGTCG GCTGATGAAG CAGGAGGGGT TGATCGTGGC CAAGCCCAAA
CGCCGCAGAT ATAACTCCTA CCTTGGAGAG ATAGGTGCCG CCCCGCAAAA CCTCATCAAT
CGAGACTTCC GTGCCGCTGC GCCCAATGAG AAGTGGCTCA CCGACATTAC TGAACTCCAG
ATTCCTGCTG GCAAGGTTTA CCTGTCGCCA GTCATTGATT GCTTTGACGG GCTGGTGGTG
AGCTGGTCGA TTGGGACTCA TCCCAACGCA CATCTCGTCA ACACAATGCT GGATGCGGCC
ATTGATGCTG TTCAAGGCAG CGAGAGCCGC CCTGTGATTC ATTCTGATCG TGGAGCTCAC
TACCGCTGGC CAGGCTGGCT CTCGAGGGTC CATGATGCAA AGTTGACTCG CTCGATGTCT
CGCAAAGGGT GCTCACCAGA CAACGCTGCG TGCGAAGGCT TTTTTGGAAG GCTAAAGATG
GAGCTGTTCT ATCCCAACAA CTGGCAATCA ACAACGATTG AGCAGTTCAT TGAAGCTGTC
GATGCGTACA TTCGTTGGTA CAACGAAAAA CGTATCAAGG TATCTCTGGG ACGTTTAAGT
CCTGTGGAAT ACCGGCACAA ACTTGGCCTA GCCGCATAA
 
Protein sequence
MYSYADRIRA VALYIKLGLR VRATIRQLGY PTKNALKGWY QHYLKHQDLP ASQAPRAPKY 
SLQQRQVAIA HYLAHDRCIA ATMRALGYPG RGTLTAWVRQ DCPDTCKSRV GRSWPATKPD
ALMCEGVVQL CARRSSAQQI ADKLGVCRGT LYNWKNQLLG PCAPASMKHS PKRSPVLDEA
ALRRQVESLR QDVRRLKIER ELLKQAHEIL KNGADIDLHR LANKDKAVLV EALHGQYELP
ELLSLVGLAR SSYFYHRARL KLADKYVDLR RSITEIFDNN YRCYGYRRVQ ASLLKECTGI
SEKVVRRLMK QEGLIVAKPK RRRYNSYLGE IGAAPQNLIN RDFRAAAPNE KWLTDITELQ
IPAGKVYLSP VIDCFDGLVV SWSIGTHPNA HLVNTMLDAA IDAVQGSESR PVIHSDRGAH
YRWPGWLSRV HDAKLTRSMS RKGCSPDNAA CEGFFGRLKM ELFYPNNWQS TTIEQFIEAV
DAYIRWYNEK RIKVSLGRLS PVEYRHKLGL AA