| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2667 |
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| Symbol | |
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| ID | 5748243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2935066 |
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| End bp | 2936265 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297762 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001563690 |
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| Protein GI | 160898108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00496589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG CAACCAACAG CCTGAACCCG AACACCGCCG CCGCCGCCAC CGATCCCTGG
GCCGATGCGA GCGCAGCCCC TGCTTCCACC GATTCCGCGG CCTCTGCAGC CTCTGCAAGC
GCCGATCCCT GGGCAACCGC CGCCACGCCA GCGCCCGATG CCTCGGCCGA TCCCTGGGGC
GCCGCCAGCG GCGGTGATGC CGCAGGCGGT GACTGGCTGG GCGCCTCGGC CGGCTCGGGC
GTTCCCGACG ACGCCCATGC CAGCCTCTGG CACCAATTGA CCACCGACGG CCTGCCCGTG
CAGGGCTGGA TCAACAGCGG CCTGGAATGG GTGGTCCACC ATTTCCGCCC CTTCTTCCAG
GCCGTGCGCA CGCCCATCGA CGGCACGCTG TCGGGCATCA CCGATGCCAT GCTGGCCCTG
CCCTGGCCGC TGCTGATCCT GGTCCTGACC CTGGTGGCCT GGCAGTTCGC GGGCCGCGCC
ATGGCCATTG GCGCCGCCGT CTCGCTGGTG GTGGTCGCCA TGCTGGGCAT CTGGCCCGAG
GCCATGGTGA CGCTGTCCCT GGTGCTGACC TCGCTGGTGT TTTGCATGGT CATCGGCCTG
CCCGCGGGGA TTTTGCTGGC CTCCAGCGAC CGTGCGCAAC GCTGGACACG CCCGCTGCTC
GACGCCATGC AGACCACGCC GGCCTTCGTC TACCTGGTGC CCGTGGTGAT GCTGTTCGGC
ATCGGCAACG TGCCCGGCGT GATCGTGACC ATCATCTTCG CGCTGCCGCC GCTGATCCGA
CTGACCAACC TGGGCATCCG CCAGGTGCGC CCCGACCTGA TCGAGGCCAG CCGCGCCTAT
GGCGCATCGC CCTGGCAGTT GCTGTGGAAG GTGCAGCTGC CGCTGGCCAT GCCGTCCATC
ATGGCCGGCG TGAACCAGGC GCTGATGCTG TCGCTGTCCA TGGTGGTGAT CGCTTCCATG
ATCGCCGTGG GCGGCCTGGG CCAGATGGTG CTGCGCGGCA TCGGCCGCCT GGACATGGGC
CTGGCCACCG TGGGCGGACT GGGCATCGTG CTGCTGGCCA TCGTGCTGGA CCGCATCACC
CAGGCCATGG GGCAGACGAC CCGTGGCGGT GCGCGCTGGT GGCACAGCGG CCCCGCCGGC
TGCATCGCCC GCCTGCTGGG CGCCGGCAAC AAGCCGGTCC ATCGCGGCAG CACCAGCTGA
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| Protein sequence | MSDATNSLNP NTAAAATDPW ADASAAPAST DSAASAASAS ADPWATAATP APDASADPWG
AASGGDAAGG DWLGASAGSG VPDDAHASLW HQLTTDGLPV QGWINSGLEW VVHHFRPFFQ
AVRTPIDGTL SGITDAMLAL PWPLLILVLT LVAWQFAGRA MAIGAAVSLV VVAMLGIWPE
AMVTLSLVLT SLVFCMVIGL PAGILLASSD RAQRWTRPLL DAMQTTPAFV YLVPVVMLFG
IGNVPGVIVT IIFALPPLIR LTNLGIRQVR PDLIEASRAY GASPWQLLWK VQLPLAMPSI
MAGVNQALML SLSMVVIASM IAVGGLGQMV LRGIGRLDMG LATVGGLGIV LLAIVLDRIT
QAMGQTTRGG ARWWHSGPAG CIARLLGAGN KPVHRGSTS
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