Gene Daci_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2662 
Symbol 
ID5748238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2927472 
End bp2928458 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content71% 
IMG OID641297757 
ProductLacI family transcription regulator 
Protein accessionYP_001563685 
Protein GI160898103 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.767927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCATCA GCATCAACGA TGTGGCCCGT GCGGCCGGGG TTTCCAAATC GACGGTATCG 
CGCGCGCTGG CGGGCGGCTC GGTCAGCGAG GAGGTCCGGG CGCGGGTCGC GGCCGCCGTG
CAGGCCACGG GTTACCGGCC CAATCTGATG GCGCGCCGGC TGCGCGCGCG CGACGCTGGC
CCCATGGGCG TGCTGGTGGC CGACATACGC AACCCGTTTT TCACGGCCCT GATCCGCGCG
GTCGAGGCCG AGGCCTATCG CCAGGGCCGG CGCGTGCTGT TGTGCAATAC CGACGAAGAC
CCGCAGCGCG AAGCCATGTA CCTGCAGCTC ATGCAGGAAG AGCGCATCGC GGGGCTGATC
TTTGCGCCCA CCCAGGCCAG CCTGCACAAG CTCGAGCGCA TGCAGCTGGA GTTCCCCGTC
GTCCTGGTGG ACCGGGCGGG CGCCCCGGCC TTCCATGACA GCGTGGTGCT GGACAACGCC
CAGGCCTGCG CCACCCTGGT CAGGCATCTG GTGGACCAGG GCCGCCGCCG CATTGCAGGC
GTCTTCGGCA GCACCAGCAG CACGGCGCGC GAGCGCTGCG ACGGCTATCT GGCCGCCATG
CGCGATGCGG GCCTGGAGCC CGACTTGCGC CAGTTGCCTC CGACCAGCGA TGCCGCCGAG
GCCGAGGTCG CGCAATGGCT GCGCCAGCCG CAGCGGCCCG ACGCCTTCGT GGCCAGCAAC
AGCCTGCTGC TGGAAGGCTG CCTGCGCGCG ATACGCGCCG CAGGCCTGCG CATCCCGGGC
GATGTGGCGC TTGCCGGTTT CGACAACGAG CGCTGGACAG AACTGGTGGC CCCCGCCATC
ACCGTGATCG AGCAGCCGGT GGAGGCCATG GGCCGCGCCG CATTCGGCCT GCTCATGGAG
CGGCTGCACG CGCCCGACCT GCCGCTGCGC AAGGTGATCA TGCAGGGGCG CTGCATCGTG
CGCGAGTCCA CCCAGGCGGC GGCCTGA
 
Protein sequence
MSISINDVAR AAGVSKSTVS RALAGGSVSE EVRARVAAAV QATGYRPNLM ARRLRARDAG 
PMGVLVADIR NPFFTALIRA VEAEAYRQGR RVLLCNTDED PQREAMYLQL MQEERIAGLI
FAPTQASLHK LERMQLEFPV VLVDRAGAPA FHDSVVLDNA QACATLVRHL VDQGRRRIAG
VFGSTSSTAR ERCDGYLAAM RDAGLEPDLR QLPPTSDAAE AEVAQWLRQP QRPDAFVASN
SLLLEGCLRA IRAAGLRIPG DVALAGFDNE RWTELVAPAI TVIEQPVEAM GRAAFGLLME
RLHAPDLPLR KVIMQGRCIV RESTQAAA