Gene Daci_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2657 
Symbol 
ID5748233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2922668 
End bp2923699 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content71% 
IMG OID641297752 
Productmajor facilitator transporter 
Protein accessionYP_001563680 
Protein GI160898098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.200148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.746282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG AGCACTCTTC GCTATCGCCC GCCCAGGGCC GTACAGCGGC CAGCCGAAAG 
GCGCCGCTGT GGCTGCTGGT GATCGTGACC ATCGTCGGCA CGCTGGCCAT GCACATGTTC
CTGCCCGCCC TGCCCGATGC GGCACGCCAG CTCCAGGCCG GTGCCAGCCA GATGCAGCTG
ACCATCACGG TCTACATCCT GGGCCTGGGC GTGGGCCAGC TGATCTATGG CCCGCTGTCG
GACAGCCTGG GGCGCCGCCC CATGCTGCTG GCCGGGCTCA TCCTCTATGC GCTGGCCAGC
CTGGCGGCCT TTCTCGCCCC GTCCGCCCCC TGGCTGATCG GCACGCTGGC CGTGGTCGGC
GGCGTGACGG CCTTCGCCAT CTGGAAGCTG CTGCCGGAAA CCGGCCAGCC CACGGGCCGC
CTGCACCTGG GCACCATCCG CGACGACTAC CGCAGCCTGC TGCGCTCTCC TGCCTTCGTG
GGCTTTGCCG TGGGCGGCGG CTGCGCCACC ACGTCCATCT ATGCCTTCCT GGCGGCCGCG
CCCTTCGTCT TCATCGAGCA GCTGCATTCC ACCAAGCATG AGGTGGCCAT CTACCTGGGC
CTGCTCATGG GCGGCATGGC CGTGGGCAAT GCGCTGGCCC GCCAGCTGAT ACGCCACTGG
CCCCTGGAGC GGCTGATGCT CAACGGCAAT CTGCTGAGCC TGGCCAGCGC GGCCATGCTG
CTGTTGCTGG CCCTGTTCAA CCAGCTCACG CCGGCCATCG TGGTGGGGCT GATGGTGCTG
TTCGCGCTGG GCTCGGGCCT GACCAGTCCT GCGGCGCTGG CCAGCGCGCT GAGCGTGCAT
CCGCGCCTCA CGGGCTCGGC CGCCGGTGTC TACGGCAGCA CCCAGATGGC CGTGGGCGGC
CTGTGCACGC TGGGCGCCAG CCTGGGCAGC AACCCGGCGC TGTCGGCAGC GCTGGCCCTG
GTGGTGGCCT GCGTGCTGGG GCAACTGGGC TTTCGCAGCG CGCTGCGCCA CGTGCAGCGG
GCGCCCGGCT GA
 
Protein sequence
MTAEHSSLSP AQGRTAASRK APLWLLVIVT IVGTLAMHMF LPALPDAARQ LQAGASQMQL 
TITVYILGLG VGQLIYGPLS DSLGRRPMLL AGLILYALAS LAAFLAPSAP WLIGTLAVVG
GVTAFAIWKL LPETGQPTGR LHLGTIRDDY RSLLRSPAFV GFAVGGGCAT TSIYAFLAAA
PFVFIEQLHS TKHEVAIYLG LLMGGMAVGN ALARQLIRHW PLERLMLNGN LLSLASAAML
LLLALFNQLT PAIVVGLMVL FALGSGLTSP AALASALSVH PRLTGSAAGV YGSTQMAVGG
LCTLGASLGS NPALSAALAL VVACVLGQLG FRSALRHVQR APG