Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2655 |
Symbol | fumC |
ID | 5748231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2920165 |
End bp | 2921556 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297750 |
Product | fumarate hydratase |
Protein accession | YP_001563678 |
Protein GI | 160898096 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0321342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA CCCGCCAGGA AAAAGACACT TTCGGACCCA TAGCCGTCCC CGCAGACAAG CTCTGGGGTG CGCAGACGCA GCGTTCGCTG CAGAACTTCG ACATCAGCGG CGAGCAGCAG CCGCGCGAGA TCATCCACGC GCTGGCCCAG GTCAAGAAGG CCTCGGCCAC CGTCAACCAC AAGCTGGGCC TGCTGGACGA GAAGAAGACC CAGGCCATCC TGGCCGCCGC CGACGAGGTG ATCGCCGGCA AGCACCCGGA CGAGTTCCCG CTGGTGGTCT GGCAGACCGG CTCGGGCACG CAGACCAACA TGAACGTCAA CGAGGTGCTG GCCAACCGCG CTAGCGAAAT CCTCGGTGGC GAGCGCGGCG AGTCGCGCCT GGTCCACCCC AATGACGACG TGAACAAGAG CCAGTCGAGC AACGACGTGT TCCCGACCGC CATGCACGTG GCTGCCGTCA CGGCCATCGA GCAAAAGCTG CTGCCCGCCC TTGCCCTGCT GCGCAACACG CTGCAGGCCA AGAGCGAGGC CTATGCCGAC ATCGTCAAGA TCGGCCGCAC CCATCTGCAG GACGCCACGC CGCTGACGCT GGGCCAGGAA ATCTCGGGCT GGGTGGCCCA GCTGGCCCAT GGCGAAAAGC ATGTGCGCGC CGCGCTGCCG CACCTGTACG AGCTGGCGCT GGGCGGCACG GCCGTGGGCA CGGGCCTGAA TGCGCCCAAG GGCTATGCCG AGGGCGTGGC GGCCGAGCTG TCCCAGCTCA CCGGCTACCC GTTCGTGACG GCGCCCAGCA AGTTCGAGGC CCTGGCCTCG TGCGACGGCC TGGTCCACGC CCACGGCGCG CTCAAGACGC TGGCCGCCAG CATGATGAAG ATCGCCAACG ACGTGCGCTG GCTGGCCTCG GGCCCGCGCA GCGGCCTGGG CGAGATCTCC ATCCCCGAGA ACGAGCCCGG CTCGTCCATC ATGCCCGGCA AGGTCAACCC CACGCAGAGC GAAGCCGTGA CCATGCTGGC GGCCCAGGTC TTCGGCAACG ACGTGGCCAT CAACTTCGGC GGCGCCTCGG GCAACTTCGA GCTGAACGTG TTCCGCCCCA TGGTCTCGCA CAACTTCCTG CAGAGCGTGC GCCTGCTGGC CGATGGCATG AAGAGCTTCA ACGACCACTG CGCCGTGGGC ATCGAGCCCA ACCGCGAGCG CATCACCGAA CTGGTGCAGC GCTCGCTGAT GCTGGTGACG GCGCTGAACC CGCACATCGG CTACGACAAG GCGGCCTACA TCGCCAAGAA GTCGCACAAG GAAGGCTCCA GCCTGCGTGA AGCCGCCGTG GCTTCCGGCC ACCTGACCGG CGAACAGTTC GACGCCTGGG TGATCCCTGC CAAGATGGTC GGCAATCTGT AA
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Protein sequence | MTATRQEKDT FGPIAVPADK LWGAQTQRSL QNFDISGEQQ PREIIHALAQ VKKASATVNH KLGLLDEKKT QAILAAADEV IAGKHPDEFP LVVWQTGSGT QTNMNVNEVL ANRASEILGG ERGESRLVHP NDDVNKSQSS NDVFPTAMHV AAVTAIEQKL LPALALLRNT LQAKSEAYAD IVKIGRTHLQ DATPLTLGQE ISGWVAQLAH GEKHVRAALP HLYELALGGT AVGTGLNAPK GYAEGVAAEL SQLTGYPFVT APSKFEALAS CDGLVHAHGA LKTLAASMMK IANDVRWLAS GPRSGLGEIS IPENEPGSSI MPGKVNPTQS EAVTMLAAQV FGNDVAINFG GASGNFELNV FRPMVSHNFL QSVRLLADGM KSFNDHCAVG IEPNRERITE LVQRSLMLVT ALNPHIGYDK AAYIAKKSHK EGSSLREAAV ASGHLTGEQF DAWVIPAKMV GNL
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