Gene Daci_2651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2651 
Symbol 
ID5748227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2916032 
End bp2916922 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID641297746 
Productglutamate racemase 
Protein accessionYP_001563674 
Protein GI160898092 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.589508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.507569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CGGCCTCTCC CATCGGCGTC TTCGACAGCG GCATCGGCGG CCTCAGCGTG 
CTGCAGGCGC TGCGCCATGA ACTGCCGCAT GAGCGCTTCG TCTACCTGGC CGACAGCGGC
AATGCACCCT ATGGCGATGC GCGTGGCGAT GCCTTCGTTC AGCAGCGCAC GCGCACCATT
GCGCGCCATC TGCGCGAGCA GCACCAGATC AAGGTGCTGG TGATCGCCTG CAACACAGCC
ACGGCAGCGG CCGTGGACAT GCTGCGCGCC GAAATGCCCG AACTGCCCCT GATCGGCGTG
GAGCCCGCCA TCAAGCCCGC TTCGCTGTCG AGCCAGACCG GCCACGTGGG CGTGATGGCC
ACACGCGGCA CGGTGAGCAG CGCACGCTTT GCCCGGTTGG TGGCCGAGCA TGGCCAGCGC
GTGCAATTCC ATGTCCAGCC GTGCGACGGA CTGGCCAAGG CCATCGAGGA AAGCACGGAG
CAACCCGTTC CCGCCGACCC CATGGCCACC GAGGTCGCGC AACTGTGCGC CAGGTATGTG
AATGCCCTGG GCAGCTTCGG ACAGAAGACG GGTGAGATGG ATTCCCTGGT GCTGGGCTGC
ACCCACTACA TATTCGCCCG CGAGCAGTTG CGCACGCTGC TGGGGCCGGA CATCCAGTTC
ATCGACACCG GCGCTCCGGT GGCACGCCAG ACGCGGCGCG TGCTGGACCG CCTGGGCACC
CTGACCAGCG AATCAGGACC CTTGCCAGCG GCAGAGGGCC AGGTCCAGCT GATGACCACG
GGATCGCTGC AGGCCCTGCA GTCTGCCGCA TCGCGCTGGC TGGAGCTGCC CGCGCAATGC
TGCTCGTCCG TTCAGGTCGG CGAATCCAGC GCCGTCCCAG CGGCCGCTTG A
 
Protein sequence
MTSPASPIGV FDSGIGGLSV LQALRHELPH ERFVYLADSG NAPYGDARGD AFVQQRTRTI 
ARHLREQHQI KVLVIACNTA TAAAVDMLRA EMPELPLIGV EPAIKPASLS SQTGHVGVMA
TRGTVSSARF ARLVAEHGQR VQFHVQPCDG LAKAIEESTE QPVPADPMAT EVAQLCARYV
NALGSFGQKT GEMDSLVLGC THYIFAREQL RTLLGPDIQF IDTGAPVARQ TRRVLDRLGT
LTSESGPLPA AEGQVQLMTT GSLQALQSAA SRWLELPAQC CSSVQVGESS AVPAAA