| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2646 |
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| Symbol | clpX |
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| ID | 5748216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2908497 |
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| End bp | 2909759 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641297735 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001563669 |
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| Protein GI | 160898087 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0645685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA AAAAAGGCTC CTCCAGCGAA AAAAACCTTT ATTGCACCTT CTGCGGCAAG
AGCCAGCATG AGGTCAAGAA GCTGATCGCG GGTCCGTCAG TCTTTATCTG CGACGAGTGC
ATCGATCTCT GCAACGAGAT CATTCGCGAC GAGCAGCCCA GCACCGAGGC CAAGGACGGC
CGAGGCGACC TGCCCACGCC CGCCGAAATC AAGGCCAACC TGGACAACTA CGTGATCGGC
CAGGACCTGC CCAAGCGCAC GCTGGCCGTT GCCGTCTACA ACCACTACAA GCGCCTGCGT
CACAAGGACA AGGCCGGCAA GGACGAGATT GAGCTGGCCA AGAGCAACAT CCTGCTCATC
GGTCCCACGG GCTCCGGCAA GACGCTGCTG GCGCAGACGC TGGCGCGCAT GCTCAACGTG
CCCTTCGTCA TGGCCGATGC CACCACGCTG ACCGAAGCCG GCTACGTGGG CGAGGACGTC
GAGAACATCA TCCAGAAGCT GCTGCAAAGC TGCGAGTACG ACGTCGAGCG TGCACAGCGC
GGCATCGTCT ACATCGACGA GATCGACAAG ATCTCGCGCA AGTCCGACAA CCCCAGCATC
ACGCGCGACG TGTCTGGCGA GGGCGTGCAG CAGGCACTGC TCAAGCTCAT CGAAGGCACC
ATGGCCAGCG TTCCCCCGCA AGGCGGCCGC AAGCATCCGA ACCAGGACTT CCTGCAGATC
GACACGACCA ACATCCTGTT CATCTGCGGC GGCGCGTTCG CGGGCCTGGA GAAGGTCATC
GAGAACCGCA CCGAGGCGTC CGGTATCGGC TTTGGCGCCA CGGTCAAGAG CAAGAAGCAG
CGCTCCATCT CGGAAGTGTT CCAGGAGATC GAGCCTGAGG ACCTGATCAA GTTCGGCATC
ATCCCCGAGC TGGTCGGCCG CATGCCCGTG GTCACGGCCC TGGCCGAACT GGGCGAAGAC
GCCCTGGTGC AGATCCTGAC CGAGCCCAAG AACGCCCTGG TCAAGCAGTA CAGCAAGCTG
CTGGCCATGG AAGGCGTGGA GCTGGAGATC CGGCCTGCCG CGCTCAAGGC CATCGCCCGC
AAGGCGCTGG CGCGCAAGAC GGGTGCCCGT GGCCTGCGCT CCATCCTGGA GCAATCGCTG
ATCGGCACCA TGTACGAGCT GCCCAATGCC GACAATGTCG AAAAGGTAGT GGTGGACGAG
TCCACCATCG AAGACGGAAA GGCGCCGCTG CTGGTTTACC GCGAAGCGGC CAAGAAGGCC
TGA
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| Protein sequence | MAEKKGSSSE KNLYCTFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EQPSTEAKDG
RGDLPTPAEI KANLDNYVIG QDLPKRTLAV AVYNHYKRLR HKDKAGKDEI ELAKSNILLI
GPTGSGKTLL AQTLARMLNV PFVMADATTL TEAGYVGEDV ENIIQKLLQS CEYDVERAQR
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT MASVPPQGGR KHPNQDFLQI
DTTNILFICG GAFAGLEKVI ENRTEASGIG FGATVKSKKQ RSISEVFQEI EPEDLIKFGI
IPELVGRMPV VTALAELGED ALVQILTEPK NALVKQYSKL LAMEGVELEI RPAALKAIAR
KALARKTGAR GLRSILEQSL IGTMYELPNA DNVEKVVVDE STIEDGKAPL LVYREAAKKA
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