| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2626 |
|---|
| Symbol | |
|---|
| ID | 5748196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2891739 |
|---|
| End bp | 2892932 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641297715 |
|---|
| Product | tail sheath protein |
|---|
| Protein accession | YP_001563649 |
|---|
| Protein GI | 160898067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3497] Phage tail sheath protein FI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.129054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000000715616 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAG CCCCGTTCCA TCATGGCATT CGCGTCACGG AAGTGAGCGA AGGCATCAAT
TCCATCCGCA TTGTGTCCAC GGCCGTGATC GGCCTCGTGG CCACTGCCAG CGACGCCGAT
GCGGCCACTT TCCCGCTGAA CCGTCCGGTG CTGGTCACCA AGGTCGATGC GGCCATCGGC
AAGGCCGGCA CCAAGGGCAC GCTGGCCCTG GCGCTGAACG CCATCAAGGA GCAGTGCCGC
CCGGTGCTGG TCGTCGTGCG CGTGGCCGAT GGCGAAGGCG CCACCGAGGC CGAACGCCGC
ACCGACCAGG ACGCCAAGGT CATCGGCACC ACCGCCGGCA ACCAGTACAC GGGCCTGCAA
GCGCTGCTGG CGGCCCAGGC CCAGCTCGGC GTCAAGCCGC GCATCCTGGG CGCGCCGGGC
CTGGACAGCC AGGCCGTGAC CGACGCGCTG GCGTCCGTGG CCATCAAGCT GCGCGGCTTT
GCGTATGCGG CGGCCATCGG CAACGATGTG GCCGAGGCCC AGGCCTACCG CGAGCACTTC
GGCCAGCGCG AACTGATGCT GCTGTGGCCC GGCTTCAAGG CACTCGACCT GTCCACCGCC
GCCGTGCAGG ACGCCTCGCC CGTGGCCTAC GCCCTGGGCC TGCGCGCGCG CATCGACCAG
GAGCAGGGCT GGCACAAGAC GCTGTCCAAC GTGCCGTTGT CCGGCGTGCT GGGCATCTCG
CGCGATGTGC ACTGGGACCT GCAAAGCCCC GATACCGAGG CCGGCATCCT CAACCAGGCC
GGCATCACCA CGCTGATCCA GAGCCAGGGC CACCGCTTCT GGGGCTCGCG CACCTGCACG
GACAGCGAGC TGTTCCGCTT CGAGTCCAGC GTGCGCACCG CGCAGGTGCT GGCCGACACC
ATGGCCGAGG CGCATTTCTG GGCCGTGGAC AAGCCCATGC ACCCCAGCCT GGTCAAGGAC
ATCCTGGAAG GCATCAACAC CAAGTTCCGC GAGTTGAAGG CCCTGGGCTA CATCCTGGAC
GGCAAGGCCT GGTACGACGA AACGGTCAAC GAGACCGCCA CGCTCAAGGC CGGCAAGCTG
GTGCTGGACT ACGACTACAC GCCCGTGCCT CCGCTGGAGG ACCTGGGCTT TCGCCAGCGC
ATCACCGATC GCTACTTCGC CGACTTCGCC CTGCGCGTGG GCACCGGCCA GTAA
|
|---|
| Protein sequence | MATAPFHHGI RVTEVSEGIN SIRIVSTAVI GLVATASDAD AATFPLNRPV LVTKVDAAIG
KAGTKGTLAL ALNAIKEQCR PVLVVVRVAD GEGATEAERR TDQDAKVIGT TAGNQYTGLQ
ALLAAQAQLG VKPRILGAPG LDSQAVTDAL ASVAIKLRGF AYAAAIGNDV AEAQAYREHF
GQRELMLLWP GFKALDLSTA AVQDASPVAY ALGLRARIDQ EQGWHKTLSN VPLSGVLGIS
RDVHWDLQSP DTEAGILNQA GITTLIQSQG HRFWGSRTCT DSELFRFESS VRTAQVLADT
MAEAHFWAVD KPMHPSLVKD ILEGINTKFR ELKALGYILD GKAWYDETVN ETATLKAGKL
VLDYDYTPVP PLEDLGFRQR ITDRYFADFA LRVGTGQ
|
|---|
| |