| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2615 |
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| Symbol | |
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| ID | 5748185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2882570 |
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| End bp | 2884549 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297704 |
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| Product | replication gene A |
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| Protein accession | YP_001563638 |
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| Protein GI | 160898056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00951013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000132404 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGTCC TGCTCGCCGC CAAATCCACC GGCCGCAGGC TGCGCACCGC CAGCCTGCAG
CAATGGGACC AGCACAAGCC CCGCCCCCAC ATGGTCCAGC GCGCCATGCA GGCGCTGGAA
AAAGCCTTGC CGCCGCAGTG GCTGCAGCCC ATGAAGCTGC TGGGCCTGGG CGACTGGCAA
AAGGGCGCGC AACACGCCAA CGGCCAGCCC GAATGGGCCG CCTGCCACGA CGCGCTGGCC
GCCATTGACG ACTTTGCCAG CCGCCACGGC CGTGCGGCCG AATGGAATCT GGACGACTAC
GAGATCTGCC AGATGGCCAG GCGCCTGAGC GACGAAGTCG GTGAGCTCGA CGCCGGCGCC
CAGGCCCAGA ACATGGACCT GGCCGCACGC GTGGACCTGG TGCGGCTGAT GCTGCGCATG
CTGGGCCTGC AGGAAAGCAC GCCGCTGGCC GGCGAGCCCG CCATCCGCCG CGCGCTGGAT
GCCGCCTGGT GGCGCCGCAT GCTGCGCCGC CACGTCACGC GCACCGTGGA GGCTGGCGCC
GTCAAGCTGG GCATCGTCAA CCGCAGCGCC GGCGGCTATG CCAGCAATAC CACCGTGCGC
CGGCGCACCG CGCAGATCGA ACGCAACGCC CGCGCGCTGG AGCGCAGCCT CTACCGAAAC
GAGGCCGGCC AGGTCTTCAC CCTGGCCGAG CTGGCCGCGC TGTCGCCGGC CAACCCCGTG
ATCCGTGGCG GCGAGCTGAT GACGCGCATC CGCGGCGCAG AGGAATATGC CGACGCGCGC
AGCCACGTCG GTCTCTTTCT CACGCTGACG GCGCCCAGCC GCTTTCACGC CGTCACGCTG
GGCAGCGGCG GCCGGCCGCG CCCCAATCCC CATTACGACG GCCGCAGCAC GCCGCGCGAT
GCCCAGCTGT GGCTGCGCAC CATGTGGGCG CGCGTGCGAT CTCACCTGGG CCGCCAGCGC
ATCGCCATGT ACGGCATCCG CGTGGCCGAG CCGCACCATG ACGCCACGCC GCACTGGCAC
GCCCTGGTCT GGGCCGAGTG CGAGGAGCAC GCCCGGCACA TCGAGGCCGC CATCCGCAAA
TGGTGGCTCA GCGAAGATGG CGACGAGCGC GGTGCCCAGC GCAACCGCGT CAACGTCAAG
CGCATGACCG GCGGCGGCGC TGCCGGCTAC GTGGCCAAGT ACATCGCCAA GAGCGTGGGC
CATGCGGCCC TGGCCGACCA CCTCGACGTG GTGCAGGGCC GCCTGTGGGA TGTGGAGCAG
GGCGGCATGC CCGGCCACCG CCGCGTGGAC GCCTGGGCCG CCTGCTGGGG CATTCGCCAG
TTCCAGGCCG TGGGCATGCC CAGCGTCTGC GTCTGGCGCG AGCTGCGCCG TGTCAGCAAG
GACCAGGTCG AACAGATCCG CATCGACGGC GACAAGGCCA GCTGGAAGGC CTGGGGCGCC
AGCCACCGCC ACGGGCCCGA CATCCCCGCC GACTGGCGCC TCTACATGGA AGCCATGGGC
GGCCACTGCC TGGCCCGCGA CCGCTGGCAT CTGCGCATGG CACGCCGCCC CGTGCCCGCC
GGCGCCGTCA ACCAGTACGG CGAGGCCATC GCGCCCGGCT GCGGCCGCGT GGTGGGCCTG
GAAACCCGGC GCGGCCAGTG GCTGGTCTCG CGCCGCATCG CCTGGCGCAG CGTGGCTCGC
GCCACGCTGG AGTTCCAGGA AAACCACGGT GCAGAAAGCG TCGAGGGCGC CGAGGGTGCC
GAGGTCGCCG ACACGGCCCC GCCCGCCCCG CCCGCCCTGC CCGCCCGCGC GCCGCTGGCG
CGCGCTTGGA CTGGTTTCAA TAACTGTACG GCCCGGCTCA CGGGCCACAC GCTGCGCGCC
CTCATCGGCC GCGGCGGGCA CCAGCGCGAG GACCGGGCCA ACCCTTCCGC GCCCGATTCC
GTGCTGCACC GCCCCGCATC CGGCGCCACG CCATCCAACC ACCCTTTCTT GACCAGCTGA
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| Protein sequence | MSVLLAAKST GRRLRTASLQ QWDQHKPRPH MVQRAMQALE KALPPQWLQP MKLLGLGDWQ
KGAQHANGQP EWAACHDALA AIDDFASRHG RAAEWNLDDY EICQMARRLS DEVGELDAGA
QAQNMDLAAR VDLVRLMLRM LGLQESTPLA GEPAIRRALD AAWWRRMLRR HVTRTVEAGA
VKLGIVNRSA GGYASNTTVR RRTAQIERNA RALERSLYRN EAGQVFTLAE LAALSPANPV
IRGGELMTRI RGAEEYADAR SHVGLFLTLT APSRFHAVTL GSGGRPRPNP HYDGRSTPRD
AQLWLRTMWA RVRSHLGRQR IAMYGIRVAE PHHDATPHWH ALVWAECEEH ARHIEAAIRK
WWLSEDGDER GAQRNRVNVK RMTGGGAAGY VAKYIAKSVG HAALADHLDV VQGRLWDVEQ
GGMPGHRRVD AWAACWGIRQ FQAVGMPSVC VWRELRRVSK DQVEQIRIDG DKASWKAWGA
SHRHGPDIPA DWRLYMEAMG GHCLARDRWH LRMARRPVPA GAVNQYGEAI APGCGRVVGL
ETRRGQWLVS RRIAWRSVAR ATLEFQENHG AESVEGAEGA EVADTAPPAP PALPARAPLA
RAWTGFNNCT ARLTGHTLRA LIGRGGHQRE DRANPSAPDS VLHRPASGAT PSNHPFLTS
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