Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2605 |
Symbol | |
ID | 5748175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2876534 |
End bp | 2877100 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641297694 |
Product | hypothetical protein |
Protein accession | YP_001563628 |
Protein GI | 160898046 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000331071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000000126895 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACCGCC TGCAAACCCA TGCCTGGCAG CTGCTGGCCC TGCTGCTGGC GGCGCTGCTG GTCTGGCAGT CGCTGGCGCG GCTGGGTGCC GAGCGCGATG CGGCGCAGGC ACGCACGGAT CTGGCGACCG ACCGCCAGGC CGCTGCCACC GCCGCGCTGC ACGCATCCGA ACGCTATCGA CAACGGGAAG GAGCCTACCG TGAACGCCTC GACTTTCTTG CACGCGACAC GGACCTGGCC CTGGCGCGCG CTGCGGCGGA TGCCGATGCT GCCCGCGCTG CTGCTGGCCG GCTGCGCGGC GACCTCGCCG ACTACATCAC CGCCCACCGT GCCGCCGCCC AGGCTCGCGC CGCTGCCGGA CAGTGCGCGC CAGACACCGC AGCCCTCGAT CTGCTCGCCG AGCTGCAGCG CCGCGCTGAC GAGCGAGCGG GAGCGCTGGC GCGCATTGCT GACGACGCCC GCCACCGAGG CAGCGCCTGC GAGCGCGCCT ACGACGCCGG GCTCGCCCTG ACCAGCGCCC TGACCAGCAC CATGACCCAG GACCCACGCC ATGCTCAAGC CCGCTAG
|
Protein sequence | MDRLQTHAWQ LLALLLAALL VWQSLARLGA ERDAAQARTD LATDRQAAAT AALHASERYR QREGAYRERL DFLARDTDLA LARAAADADA ARAAAGRLRG DLADYITAHR AAAQARAAAG QCAPDTAALD LLAELQRRAD ERAGALARIA DDARHRGSAC ERAYDAGLAL TSALTSTMTQ DPRHAQAR
|
| |