Gene Daci_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2602 
Symbol 
ID5748172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2874990 
End bp2875340 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content70% 
IMG OID641297691 
ProductGPW/gp25 family protein 
Protein accessionYP_001563625 
Protein GI160898043 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0538459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000023308 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGCC ACACAGGCCG CCGCATCGAG GGCATGGAGC ATCTGCGCCA GAGCGTGGCC 
GACATCCTGT CCACGCCCAT CGGCTCGCGC GTGATGCGCC GCGACTATGG ATCGCTGGTC
CCGGCGCTGC TGGACCAGCC CGACAACAAC GCCACCCAGG CACGCCTGCG CGCCGCCGTG
GCCAGCGCGC TGATGCGCTG GGAGCCCCGC ATCCGCCTGA CACGCATCGT GATCGAGCGC
GATCCGGCCA CACCCGCGCG CGCCGACCTG ACGCTGATCG GCACCTTCAA CAACACGCGC
CGCCCGGCAC CGCTGAGCCT GCAGATGCCT ATTGCCCGCA CCCTTTCATG A
 
Protein sequence
MNRHTGRRIE GMEHLRQSVA DILSTPIGSR VMRRDYGSLV PALLDQPDNN ATQARLRAAV 
ASALMRWEPR IRLTRIVIER DPATPARADL TLIGTFNNTR RPAPLSLQMP IARTLS