Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2601 |
Symbol | |
ID | 5748171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2874136 |
End bp | 2874993 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297690 |
Product | baseplate J family protein |
Protein accession | YP_001563624 |
Protein GI | 160898042 |
COG category | [R] General function prediction only |
COG ID | [COG3948] Phage-related baseplate assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.724499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000333065 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCAAG ACATGACCCC TGCACTGGAT GCCCTGCCGC CGCCCGGCGT CGTCGAGACG CTGGATTTCG AGCGCATCCT CGACGCCCAC CGCGCCGATC TGCTGGCGCG CCACCCCGAG GCCGCCGAGG TCCTGGCGCT GGAGAGCGAG CCGCTCAACA AGCTGCTGGA GGCGCACGCC TACCGCGAGC TGCTGTACCG GGCGCGCGTC AATGATGTGG CGCGTGCGCA TTTGATTGCG TTCGCCCAGG GCTCGGACCT GGACCACAAG GGCGCCTTCT ATGACGTGGC CCGACTGCCC GGGGAAAGCG ACGAACGCTA CCGCCAGCGC ATCCTGCTGC GCGTGCGCGC GCTGGCCGGC AGCGGCACGG CCGAGCACTA CGAGCACCTG GCCATGACGG CCAGCGCCAA TGTGCACAGC GCCATTGCCA CACAACCCCA GCCCGGCCGC GTGAGCGTGC AGCTGTGGCT GGTCGAGCCC GCACAGGCCG AAGAGACGCT GGCCATCGTG CTGTCGGCCC TCAATGCGCC AGGCGCACGG CCGCTGGGCG TGCCCGTGTC GGTATCGCTG GCGCGCCCGC ACCCCATCGA CATCACGGCA CACCTGCTGC GCGAGCCCGG TGCGCCCGTG GACATCGTGG CGCGCCTGCA GGCCGGCCTG GCCGCCCAGA TTGCAGCCTA CGCGCTGCTG GGCCGCGATG TGCCGCGCTC GTGGATCACC ACGCGCCTGC ATGTGGACGG CATTGCCCGC GTCACCTACC CCGACGCCCA GGCCCCGGCC GAGCTCACGC CGCTGGCCGC CGACGAATAC CCGGTGCTGG GCCGAGTGCA GCTGGTGGAC GAGGGCCTGC AGGCATGA
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Protein sequence | MKQDMTPALD ALPPPGVVET LDFERILDAH RADLLARHPE AAEVLALESE PLNKLLEAHA YRELLYRARV NDVARAHLIA FAQGSDLDHK GAFYDVARLP GESDERYRQR ILLRVRALAG SGTAEHYEHL AMTASANVHS AIATQPQPGR VSVQLWLVEP AQAEETLAIV LSALNAPGAR PLGVPVSVSL ARPHPIDITA HLLREPGAPV DIVARLQAGL AAQIAAYALL GRDVPRSWIT TRLHVDGIAR VTYPDAQAPA ELTPLAADEY PVLGRVQLVD EGLQA
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