Gene Daci_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2597 
Symbol 
ID5748167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2869008 
End bp2869541 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID641297686 
Producthypothetical protein 
Protein accessionYP_001563620 
Protein GI160898038 
COG category 
COG ID 
TIGRFAM ID[TIGR01643] YD repeat (two copies) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0236923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000294879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCACGACG ACAAGACAGC GCAGGGCTGG CCCCTGCCCC ACCCCGACAA CCGTCTGGAA 
GACGACGTGC TGCGCCTGCG CCAGGCCGTG CAGGACGTGG ACCAGGCGCT GACCGCAGCG
CGCCAGCTCA TCGACACCAA GGCCAGCTCC CAGGGCGTGC AGGACGCCAT GGACATCGTG
GCCCGCCGCA TAGAGCAGCT GGAGACCGCG ACCCAGGCCC TGAGCACCGG CAAGGTGGCC
AGCGTCAACG GCGTGGCCGG CGTCAACGTC AAGCTCAACC CCGAGCACAT CGCGCTGGGC
CCGGCCAACG GCGCCACCAG CGAAAGCTTC GGCTACGACG CCCAAGGCCG CATCAGCAGC
ATCACGCGCA GCGTCAACGG CTTCAGCGCC ACCACCGCCG TCAGCTACGA CGGCGCCGGC
CGCGTCTCGC AGCAGCAGAC CAGCTACCGC GGGCGCGTGC GTACGGAAAC CTATGCCTAC
GACGCCGCCA CGGGGCGGGT GTCGGGGGTC AATGCCACGG AGGTACAGGG ATGA
 
Protein sequence
MHDDKTAQGW PLPHPDNRLE DDVLRLRQAV QDVDQALTAA RQLIDTKASS QGVQDAMDIV 
ARRIEQLETA TQALSTGKVA SVNGVAGVNV KLNPEHIALG PANGATSESF GYDAQGRISS
ITRSVNGFSA TTAVSYDGAG RVSQQQTSYR GRVRTETYAY DAATGRVSGV NATEVQG