Gene Daci_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2587 
Symbol 
ID5748157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2860180 
End bp2860620 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content68% 
IMG OID641297676 
ProductP2 GpU family protein 
Protein accessionYP_001563610 
Protein GI160898028 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00097389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000000588078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGATCA CACTGGGCCA GTTTGCCTTT GGCATCGACA CACTGGCATT CGACAAGCTG 
GTGCGCAGCA GCACCTGGCG CCACCCGAGC AACAGCCGCG TGGGCGCGCG CCCCGCCCGC
CAGTCACTGG GCCCAGGCGA TGAAACGCTG GGCCTGACCG GCGTGCTCGC ACCCGAGTTC
CGGGGCACGG CCAAGTCGCT GGACGACCTG CGCGAAATGG CCGACCAGGG CAAGGCATGG
GCCCTGGTGG GCGGCGAAAG CATCCTGGGC GCCTGGGTCA TCGAGAGCCT CCAGCAGACC
GGCACGCACT ACACACCGGG CGGCAAGCCG CGCCGCATCG AGTTCGATCT CAAGCTGGCC
CGCGTGGACG ATCACCTGGC CGAAGGCGGC GGCGGCGTCG ACCCCTGGCC CGATGACGAC
TTCTGGGAAT GGTGGATCTG A
 
Protein sequence
MLITLGQFAF GIDTLAFDKL VRSSTWRHPS NSRVGARPAR QSLGPGDETL GLTGVLAPEF 
RGTAKSLDDL REMADQGKAW ALVGGESILG AWVIESLQQT GTHYTPGGKP RRIEFDLKLA
RVDDHLAEGG GGVDPWPDDD FWEWWI