| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2586 |
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| Symbol | |
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| ID | 5748156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2859179 |
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| End bp | 2860180 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297675 |
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| Product | late control D family protein |
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| Protein accession | YP_001563609 |
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| Protein GI | 160898027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3500] Phage protein D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000462859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000849595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACGC AGGAATACTT GCACGCCAAG CCCCAGTACG AAATCGTCCT GGACGGGCGC
GACATCACCA GCAGCGTGAA CACGCGGCTG ATGAACCTGA CGCTGTCCGA ATCGCGCGGC
GAAGAGGCCG ACAAGCTGGA CATCACGCTG GACGACAGCG ATGGGCGCCT GCCCATGCCG
GGCAAGGGAT CCAAGATCGC GCTGAAGCTG GGCTGGGCCG GCCACGGCCT GGTCGACAAG
GGCACCTACG AGGTGGACGA GGTGGAGCAC CAGGGTGCGC CCGACAGGAT CGTGGTGCAT
GCGCGCTCGG CCGAGCTCAA GCGCCAGCTG CGCACGCGCT CCGAGCACAG CTACCACAAC
AGCACGCTGG GCCAGATCGT GCGCAGCATT GCGCAGCGCA ACGGCCTGCA GGTGCGCGTG
GACGCGCAGT TCGAGAACCT GCGCGTGGAC CACATCGACC AGACCCACGA AAGCGACCTG
AACTTCTGCA GCCGCCTGGC GCGTCAGTAC GACGCCGTGT GCACGGTCAA GAAGGGCAAG
CTGGCCTTCA TCGCCATCGA CAGCAAGATC ACCGCTGCCG GCCAGGCCGT GGAGGCCGCC
ACGCTCACGC GCGCCGAGGG CGACAGCCAC GCCTACCACA CGGCCGCGCG CAACGACTAC
AGCGGCGTTC GCGCGTACTG GAACGACGCG GATCGCGCCG AAAAACGCAG CGCCACGCAG
GGCGCCGAGG ACAACGAAAA GCGCCTGAAG GACACCTACG GCAGCGAGGC CGAGGCGCAG
GCCGCAGCCA AGGCCGAGAT GGGCCGCATC AACCGCGCCA AGGCCACCAT GGGCCTGAAG
CTGGCGCTGG CGCGGCCCGA CCTGATGCCG CAGACGCCGC TGAAGCTGCA GGGGTTCAAG
GCGGAGATCG ATGACACGCC GTGGCTGGTC GTCAAGATCC AGCATGAGCT GGGCGACGGC
GGCTTCACCT CCAAGCTGAC GCTGGAGACG CGTGCCAAGT GA
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| Protein sequence | MATQEYLHAK PQYEIVLDGR DITSSVNTRL MNLTLSESRG EEADKLDITL DDSDGRLPMP
GKGSKIALKL GWAGHGLVDK GTYEVDEVEH QGAPDRIVVH ARSAELKRQL RTRSEHSYHN
STLGQIVRSI AQRNGLQVRV DAQFENLRVD HIDQTHESDL NFCSRLARQY DAVCTVKKGK
LAFIAIDSKI TAAGQAVEAA TLTRAEGDSH AYHTAARNDY SGVRAYWNDA DRAEKRSATQ
GAEDNEKRLK DTYGSEAEAQ AAAKAEMGRI NRAKATMGLK LALARPDLMP QTPLKLQGFK
AEIDDTPWLV VKIQHELGDG GFTSKLTLET RAK
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