| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2578 |
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| Symbol | |
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| ID | 5748148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2853715 |
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| End bp | 2855022 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297667 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001563601 |
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| Protein GI | 160898019 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0920682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000863412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGCGC TGGGCGTCTG GATGAATGGG GAGCGGGTGG GCACCTGGGA GGTCACGCGC
ACGGGCCGCC ATGTGTTCGC CTATGACCCG GCCTGGCCGC AGAGCGCGCA TGCGCGGCCG
CTGTCGCTGT CCATGCCCTT CACCCGCGAC CTGACGGTGG CGGGCGAGGT GGTGGCCCAT
TATTTCGACA ACCTGCTGCC GGACGGCGAG GGCATTCGCC GGCGCATTCA CCAGCGCTTC
GGGCTGCGCG GGATCGATGC GTTTTCGCTG TTGGAAGCCA TTGGCCGCGA TTGCGTGGGG
GCCGTGCAAC TGTTGCCCGA GGGGGCCGTA CCCGAAGGGT TCGATCAGGT GCGGTTCGAG
CCGCTGAGCG AGGCGCAGAT TGCAGAGCAC CTGGCCAGTC TGGGTGGCGG GTTTGGTGCG
CTGGAGGTGG ACCAGGAGTT CCGGCTGTCC ATTGCCGGTG CGCAGGAGAA GACGGCGGTG
CTGCGCCATG GCGGCCAGTG GTGCCGCCCG CTGGGCGCGA CGCCGACCAC GCATATCCTG
AAGCCGGCCA TCGGCGTGGT GCCGCACTGG CACTACGACC TGAGCGAGTC AGTGGCCAAT
GAGTGGCTGT GCGCCCGGCT GCTGGCCGAG CTGGGCTTTG CCGTGGCCGA CAGCAGCATC
GAGACCTTTG GCGGGCAGCA GGTGCTGTGC GTGGAGCGCT TTGACCGCGC CTGGACGGCC
CAGGGCTGGA TTGCGCGTCT GCCCCAGGAA GACTTCTGCC AGGTGCGCGG CGTTGCCAGC
GCCAACAAGT ACGAGACCCA CGGCGGGCCC GGCATGCTGC AGTGCCTGCA GGTGCTGCAG
CATGGCAGCG AGCCTGCCCA GGATTGCGCC CGCTTCGTGA TGGCCCAGCT GGCGTTCTGG
CTGCTGGCGG CCACGGACGG GCATGCCAAG AATTTCTCGG TGTTCCTGCA GCCGGGCGGC
GGCTATGAGA TGACGCCGCT GTACGACGTG CTGTCGGCCT GGCCCATCAT CGGTCACGGC
CACGGCAAGA TTGCCCGCCA GCGCGCCAGG ATGGCCATGG CCCTGCCGGG GCGCAGCCGC
CACTACCGCC TGGCCGAGAT CCAGCGCCGC CACTGGAAGG CCCTGGCCGA GACCACGCGC
ATCGCAGGCC TGTGGGAGAG CATGGTGGAG ATGGTCGAGG CGCTGGACGG CGCCATCGAC
CGGCTGCAGC CGCGCCTGCC GGCCAGCGTG CCGCAGCCTA TGGCCCGGCA GATCTTCGAC
GGGGCGCGCG ACCAGGCTCG CCGCTTTCTT GCGGGCAGCG ATCACTGA
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| Protein sequence | MAALGVWMNG ERVGTWEVTR TGRHVFAYDP AWPQSAHARP LSLSMPFTRD LTVAGEVVAH
YFDNLLPDGE GIRRRIHQRF GLRGIDAFSL LEAIGRDCVG AVQLLPEGAV PEGFDQVRFE
PLSEAQIAEH LASLGGGFGA LEVDQEFRLS IAGAQEKTAV LRHGGQWCRP LGATPTTHIL
KPAIGVVPHW HYDLSESVAN EWLCARLLAE LGFAVADSSI ETFGGQQVLC VERFDRAWTA
QGWIARLPQE DFCQVRGVAS ANKYETHGGP GMLQCLQVLQ HGSEPAQDCA RFVMAQLAFW
LLAATDGHAK NFSVFLQPGG GYEMTPLYDV LSAWPIIGHG HGKIARQRAR MAMALPGRSR
HYRLAEIQRR HWKALAETTR IAGLWESMVE MVEALDGAID RLQPRLPASV PQPMARQIFD
GARDQARRFL AGSDH
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