| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2574 |
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| Symbol | |
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| ID | 5748143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2847317 |
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| End bp | 2848567 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297662 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001563597 |
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| Protein GI | 160898015 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0205378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT TGCCATCGAA CCCTGCCGCG CCCGCTTTGC CGCGCCATCT TCTTCTTGCC
CCTCTGTGCC TGGCCGCCGC GCTGGCGCTG GGCGCCTGTT CCAAGGCCGA GCCGCCGCCC
GAGCCGGTGC GCGCCGTCAA GCTGCTCACC GTAGGCGTGG GCGCGCTGGA CACGCAACTG
GAATACGCGG GCGAGGTGCG CGCGCGCATA GAGTCGCGCC TGGGCTTTCG CGTGGCCGGC
AAGCTCGTTC GCCGCGAGGT GGAGCTGGGC CAGCACGTGC AGGCAGGCCA GTTGCTGGCG
CGGCTCGATG CCAGCGACTA CCGGCTGGGA GCTGACGCCG CGCGCGCCCA GGTGGCGGCC
GCGACCACGC AGCGCGATCT TGCCGCCGCC GATGTGAGGC GTTACTCGCA GCTGAAGGCG
CAGAATTTCA TCAGCGGTGC GGAGCTGGAG CGGCGAGAGG CCACGCTCAA GTCCGCCCAG
GCCACGCTGG ACCAGGCCAA AGCGCAGCTG GCATCGCAGA GCAACCAGGA GGCCTATGCG
CAACTGCTGG CCGATGTGCC CGGCGTGGTG ACCGGCATAG ACGCCGAGCC CGGCCAGGTG
GTGTCGGCCG GCTCGCCCGT GGTGCGCATT GCCCAGGACG GCCCGCGCGA CGTGGTGTTC
GTGGTGCCCG AAGACAAGCG CGGTGCCATC CGCGTGGGCC AGAAGGTGAA TGTGCGCCCC
TGGTCGGCCG GCATGCAGCC ATTGCAGGGC CAGGTGCGCG AGGTGGCGGC CAGTGCCGAT
CCCGTCACGC GCACCTACCA GGTGAAGGTG GCTTTGCCCA CCTCGGACGC CGCCGCCGTG
CCGCCGCTGG GTGCCACGGT CCACGCATTG CCCGAGGGCA TGGGCCCCAC GGGCCAGCCC
GTGATCAAGC TGCCCACCAC CGCGCTGCGC CAGGAAGGCG GCGGCGGCCA GGGCACGGCC
GTGTGGGTGT TCGACGCCGC CAGCAGCACG GTGAAGCTGC AGCCCGTGCA ACTGGCCACG
GCCGATGGCA ACGAGGCCGT GATTGCCGCT GGCCTGACGC CCGGCATGCA GGTGGTGGCC
GCCGGCGTGC ATGTGCTCAC GCCAGGCCAG AAGGTCACGG TCTATCAGGA CCGTTATGAC
AAGGCCCCGC AGCCGGCACA GCAGCAGCCG GCTCAGCAGC GGCCGCAACA GACACAGCCT
GCACAGGCAC CTGCCGCCGC AGGCGCTGCG CCCAGCGGAG CGGCCCAATG A
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| Protein sequence | MPDLPSNPAA PALPRHLLLA PLCLAAALAL GACSKAEPPP EPVRAVKLLT VGVGALDTQL
EYAGEVRARI ESRLGFRVAG KLVRREVELG QHVQAGQLLA RLDASDYRLG ADAARAQVAA
ATTQRDLAAA DVRRYSQLKA QNFISGAELE RREATLKSAQ ATLDQAKAQL ASQSNQEAYA
QLLADVPGVV TGIDAEPGQV VSAGSPVVRI AQDGPRDVVF VVPEDKRGAI RVGQKVNVRP
WSAGMQPLQG QVREVAASAD PVTRTYQVKV ALPTSDAAAV PPLGATVHAL PEGMGPTGQP
VIKLPTTALR QEGGGGQGTA VWVFDAASST VKLQPVQLAT ADGNEAVIAA GLTPGMQVVA
AGVHVLTPGQ KVTVYQDRYD KAPQPAQQQP AQQRPQQTQP AQAPAAAGAA PSGAAQ
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