Gene Daci_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2570 
Symbol 
ID5748139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2842817 
End bp2843836 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID641297658 
Producthypothetical protein 
Protein accessionYP_001563593 
Protein GI160898011 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.052781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGC GCGACTTTCT TCACCACGCA GACCTGCCCC CGCTCGGCCG CCGCCAACTG 
CTGGCCGGCA CGGGCGCCAT GGCCCTGTCG GGCCTGCTGC CTGCGGCCGC GCTGGCGCAG
GACGCCTGGC CCACGCGCCC CATCCGCTTT GTCGTGCCCT TTGCGCCCGG CGGCAGCTCG
GAAATCGTGG CGCGCTCCAC GGCCGCCGAG CTGTCCAAGA CCCTGGGCCA GAACGTCTTC
GTGGACAACA AGCCCGGCGC GGCCGGCAAC ATCGCCATGC AGGAAGTGGC GCGCGCCGAT
GACCAGAGCA CCGTCATCCT GGGCCACATC GGCACCCTGG CCGTCAATCC CTACATCTTC
GACAAGCTGC CCTACGACGC GAACAAGGAC TTCCAACCCG TCAGCCTGCT GGCCAAGGTG
CCCAGCCTGT ACGTGGTCCA CCCCGATGTG CCGGTCAAGA ACCTGCGCGA ACTCATCGCC
TACGCCAAGA AGAAGCCCGG CCAGCTCAGC TACGGCTCGG CCGGCAATGG CAGCGCCGGG
CACCTGGCCT TCGAGTACCT GAAGATGACG GCCGAGATCT TCATGCTGCA CGTGCCCTAT
CGCGGCACGG GGCCGATGAT GACGGACCTG ATGTCAGGCC GCCTGGACGC TGCATCGGTC
GGCGCTGCCG CCCTGCTGCC CTTCATCAAG GCGGGCAAGG TGCGCTGCAT CGCCACGGGA
TCGACCCAGC GCCTGCCCCA GTTGCCCGAC GTGCCCACCG TGGCCGAGCA GGGCTTCCCG
GGCTTCGAGA TGACGCAGTG GTACGGCATG CTCGCCCCCT CCAGCATGAC CCGAGCCCAC
GTGGACAAGC TGGCCGCCGA GTGCGCCAAG GCCGTCAAGG CGCCCGACGC GCTCAAGCGC
CTGCAGGGCG ATGCGGCCGA GCCCATCGGC AGCACGCCCC AGCAGTTCGC GCAGTTCATT
GCCACCGAGC AGACGCGCTG GCAAAAGGTG CTCAAGCGCG CCCAGGTCAA GCCGGACTGA
 
Protein sequence
MPSRDFLHHA DLPPLGRRQL LAGTGAMALS GLLPAAALAQ DAWPTRPIRF VVPFAPGGSS 
EIVARSTAAE LSKTLGQNVF VDNKPGAAGN IAMQEVARAD DQSTVILGHI GTLAVNPYIF
DKLPYDANKD FQPVSLLAKV PSLYVVHPDV PVKNLRELIA YAKKKPGQLS YGSAGNGSAG
HLAFEYLKMT AEIFMLHVPY RGTGPMMTDL MSGRLDAASV GAAALLPFIK AGKVRCIATG
STQRLPQLPD VPTVAEQGFP GFEMTQWYGM LAPSSMTRAH VDKLAAECAK AVKAPDALKR
LQGDAAEPIG STPQQFAQFI ATEQTRWQKV LKRAQVKPD