Gene Daci_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2566 
Symbol 
ID5748135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2839538 
End bp2840521 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID641297654 
Producthypothetical protein 
Protein accessionYP_001563589 
Protein GI160898007 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.270371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.120506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC TCATCCGCAA CCCCCTCGCC CAGACCCTTC TCGCCGCCGC GCTGTCGGCG 
GCCAGCCTTG CCGCCCAGGC CTTCCCCAAC AAGCCCGTCA CCATCGTCGT TCCCTACGCG
GCCGGAGGCT CCACCGACGT GCTGGCCCGC GTGCTGGCCG AGGCCATGAC GCGCGACCTG
GGCCAGCAGG TCATCGTCGA GAATCTGGGC GGCGCCGGTG GCACCATCGG CACCAGCCGC
GTCACACGCG CCCAGGCCGA CGGCCACACC TTGCTGCTGC ACAACATGGG CATCGCCACG
GCACCCGCGC TCTACAGCAA GCTCGCTTTC GATGTGAGGC GCGACCTGGA ACCCATCGCG
CTGGCCGGCG ACGTGCCCAT GATCCTGGTG CGCAGCAAAG GCTTTGCGCC CGCCACGCTG
GCGGACTTCA TCGCCCACAT GAAGGCCAAA CCGGGCGAAG TGCGCTTCTC GCATGCCGGC
GTAGGCGCCA CCTCCCACCT GTGCGCCATG CTGCTGCTGC AGACCACCTC CACCGAGGCC
ACCCTGGTGC CCTACCGTGG CACGGGCCCG GCCCTGCAGG ACCTGGTGGC AGGCAATGTC
GATGTCATCT GCGACCAGCC CGTGGCCACC GGCCCGCACA TACAGGCGGG CATGCTCAAG
GGCTACGCCG TCGCCACGCG CGAACGCCTG CCCTCCCTGC CCGATGTGCC CACCTTCGCG
CAGGCCGGCC AGCCCGGCTT CGAGCTTGCC GTATGGCACG GCCTGTACGC TCCGCGAGGC
ACGCCCCAGG CCGTCATCGA ACGCCTCAAC AAATCCCTGC GCACCGCCCT GTCCGAGCCC
GCCCTGGTCA AGCGCTTCAC GGACATGAGC GTCATCATCC CGCCCGCAGA CCGCCTCACC
CCCGACGCCC TGCGCCAGCA CACCACCGCT GAAATCAAGC GCTGGGACCC GGTGATCAAG
GCTGCGGGGG CCAAGGCGGA ATAG
 
Protein sequence
MRHLIRNPLA QTLLAAALSA ASLAAQAFPN KPVTIVVPYA AGGSTDVLAR VLAEAMTRDL 
GQQVIVENLG GAGGTIGTSR VTRAQADGHT LLLHNMGIAT APALYSKLAF DVRRDLEPIA
LAGDVPMILV RSKGFAPATL ADFIAHMKAK PGEVRFSHAG VGATSHLCAM LLLQTTSTEA
TLVPYRGTGP ALQDLVAGNV DVICDQPVAT GPHIQAGMLK GYAVATRERL PSLPDVPTFA
QAGQPGFELA VWHGLYAPRG TPQAVIERLN KSLRTALSEP ALVKRFTDMS VIIPPADRLT
PDALRQHTTA EIKRWDPVIK AAGAKAE