Gene Daci_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2562 
Symbol 
ID5748131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2836271 
End bp2837368 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID641297650 
Productferrochelatase 
Protein accessionYP_001563585 
Protein GI160898003 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.722508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.132687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCC GCTTCGCGCC AGAACCTCCA TTCCGCCACG ACCAACCCCA GCGCACCGCC 
GTGCTGCTGT GCAACCTTGG AACGCCCGAT GCGCCCACGG CTCCGGCCGT GCGCCGCTAC
CTGGCGCAGT TCCTGGGCGA CGACCGCGTG GTCGAGATCC CCAGGATTGC CTGGCTGCCC
ATCCTGCACG GCAGCATCCT GCGCACGCGG CCGACCAAGT CGGCGGCCAA GTACGCCACC
GTCTGGCATG AGAAGGACGG CTCCCCCCTG CAGCACTGGA GCGCGCGCCA GGCCCTGCTG
CTGCGCGGCT GGCTGGGCGA GGCCGGCCAC AACGTGCTGG TGCGCCATGC CATGCGCTAC
GGCAACCCGT CCATCCCCAG CGTGCTCGAT GCCCTCAAGG CCGAAGGCGC CACGCGCATC
CTCATCCTGC CGCTGTACCC GCAGTACTCC GGCACGACCA CGGCCAGCGT GTTCGATGCG
GTCTACGACT GGGCCCGCAC CCAGCGCCAT ATTCCCGAGC TGCGCTTCGT CAACCGCTAC
CACGACGACG CTTCCTATAT CGACGCGCTG GCCCAGCGCA TCGAGGCCCA CTGGCGCGGC
AACGGCCGTG GCGAAAAGCT GGTCATGAGC TTTCACGGCG TGCCCGAGCG CACGCTGCAC
CTGGGCGACC CCTACCACTG CGAATCGCGC AAGACCGCAC GCCTGCTGGC CGAGCGCCTG
GGCCTGTCGC CCTCGCAATA CCTGGTGACC TTCCAGTCGC GCTTTGGCAA GGCCAAATGG
CTGGAGCCCT ATACCGAGCC CTCACTGATC GAGCTGGCAC GCAGCGGCAC CAAACGGGTG
GACGTGGTCT GCCCCGGCTT CACCAGCGAC TGCCTGGAAA CGCTGGAGGA AATCAGCCAG
GAAGCGCGCG AGGCCTTCCT GCATGCCGGT GGCGAGCAGT TCGAGTTCAT TGCCTGCCTC
AACGACAGCG CGCCCTGGAT CACGGCGCTG AGCCGCATCG CCCAGCAGCA TATGCAGGGC
TGGCCCACGC AGAAGGCGCC GCAGGCCGAA CTGGACGCCA GCCTGGAGCG CGCCAAGGCC
GTGGGCGCAC AGCGCTGA
 
Protein sequence
MPSRFAPEPP FRHDQPQRTA VLLCNLGTPD APTAPAVRRY LAQFLGDDRV VEIPRIAWLP 
ILHGSILRTR PTKSAAKYAT VWHEKDGSPL QHWSARQALL LRGWLGEAGH NVLVRHAMRY
GNPSIPSVLD ALKAEGATRI LILPLYPQYS GTTTASVFDA VYDWARTQRH IPELRFVNRY
HDDASYIDAL AQRIEAHWRG NGRGEKLVMS FHGVPERTLH LGDPYHCESR KTARLLAERL
GLSPSQYLVT FQSRFGKAKW LEPYTEPSLI ELARSGTKRV DVVCPGFTSD CLETLEEISQ
EAREAFLHAG GEQFEFIACL NDSAPWITAL SRIAQQHMQG WPTQKAPQAE LDASLERAKA
VGAQR