Gene Daci_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2560 
Symbol 
ID5748129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2833959 
End bp2835071 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID641297648 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001563583 
Protein GI160898001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.208635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAA ATCATATGAA ACGACTTCCT CTTGCGGCCA TCCTGGCCGT TTTCTTTGGC 
TGGCTGCTGT GGAGCGTCTC GGTGCGCCAG GCCGCGCTGT TCGCCGTGGG CCTGGGCCTG
GGCGGGGTGC TGGCCGGCAA GCGCTTCGGC TTCACCACGG GCTGGCGCAT GCTGATCGAG
GACAAGGACG CCAGCGGCGT CTTCGGCCAG TTGCTGCTGC TGGCGCTGGC CGCCGCGCTG
GCCATGCCGC TGCTGGGCCA CTATCCCGAA CTCACGGCCG CCCTGGGCCC GCCCAGCATC
AGCCTGCTGG TGGGCGCCTT CGTCTTCGGC CTGTGCATGC AGATTGCAGA CGGCTGCGGC
AGCGGCACGC TGTACAAGGC CGGCATGGGC ATTCCCATGA ATGCGGCCAT CCTGCCCGTG
TTCGCCATCG GCAGCTTCCT GGGCAGCCTG CACCTGGGCT GGTGGCTGGA CCTGGGCAAC
ACCCAGCCCG TGGGCCTGGT CACGGCCTGG GGCTGGGCCC CTGCCCTGCT GGCCACGCTG
GCGGCGCTGG CCGTGGTCGC GCTGGGCGTG GCCTGGTATG TGCGTGGCGC CAATGTGGCG
CTCAAGCGCC CGGCCAAGCC GCTGTTCGTG CGCAAGTGGG TGGCGGGCGC GGTGCTGCTG
GCCGTGCTGA CCACGCTCAA CCTCGTCATT GCGGGCCAGC CCTGGGGCGT GGTCTACGGC
TTCGGCCTGT GGGCCGCCAA GATCGCCAAC GCCACGGGCG CCGTGGACCT GGCCGGCAAC
TGGTTCTGGA GCCAGCCCGG CAACGCCGCG CGCCTGCACG AGACCGTGCT GCTGGACGTG
ACCAGCATCA CCAACATCGG CATCCTGGGC GGCGCCCTGT GGGTGGCTGC CGCCAAGCCC
GTCAATGCCA AGCCGCTCAC GGGCACGCAA TGGATGGTGG CCCTGGTGGC CGGCCTGGTG
CTGGGCTACA GCTCGCGCCT GGCCTTCGGC TGCAATGTGG GCGCCATGCT CTCGGGCATC
TCCACGGGCA GCATCCACGG CTGGATCTGG GTGCCGCTGG CCTTTGCCGG CACCATCTTC
GGCCTGCGCA TCCGCCGCCA CTTCAATTTC TGA
 
Protein sequence
MEKNHMKRLP LAAILAVFFG WLLWSVSVRQ AALFAVGLGL GGVLAGKRFG FTTGWRMLIE 
DKDASGVFGQ LLLLALAAAL AMPLLGHYPE LTAALGPPSI SLLVGAFVFG LCMQIADGCG
SGTLYKAGMG IPMNAAILPV FAIGSFLGSL HLGWWLDLGN TQPVGLVTAW GWAPALLATL
AALAVVALGV AWYVRGANVA LKRPAKPLFV RKWVAGAVLL AVLTTLNLVI AGQPWGVVYG
FGLWAAKIAN ATGAVDLAGN WFWSQPGNAA RLHETVLLDV TSITNIGILG GALWVAAAKP
VNAKPLTGTQ WMVALVAGLV LGYSSRLAFG CNVGAMLSGI STGSIHGWIW VPLAFAGTIF
GLRIRRHFNF