Gene Daci_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2557 
Symbol 
ID5748126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2831742 
End bp2832650 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID641297645 
Productalpha/beta hydrolase fold 
Protein accessionYP_001563580 
Protein GI160897998 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.92181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.24195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA AAGCATCTTC CTCATCCGCG CCCGTACCCG CTTCCTGCTA CACGCAATGC 
GCGGGCTACG AGATCCACTA CATGGACTGG CAGCCCGCGC CCGACGTGGC GCCAGCGGGA
ACCGTCGTCG CCTGGCACGG GCTGGCACGT ACGGGGCGCG ACATGGATGC ACTGGCGCAG
TTCCTGGCAG GCCAGGGCTG GCGCGTGATC TGCCCCGACA CGCCGGGCCG GGGCCTGAGC
CAGTGGAGCC GCGCGCCGCG CGAGGAATAC CGGCTGGGCT TCTACGCCCG CATTGCGCGC
GGGCTGTTCG ATGCGCTGGG GCTGGAGCGC GCGCACTGGG TGGGCACGTC CATGGGCGGG
GCGATCGGCA CGGTCTGCGC CTCGGGCCTG TTCGAGCCGT CGCTGCGCGC ACGCATTGCG
ACGCTGGTGC TCAATGACAA TGCGCCGCAG CTGGCCGAGT CGGCGCTGGC ACGCATCAGG
TCCTATGCGG GCCAGCCCCC GGCCTTCGAT ACGGTGGGCG AGCTGGAGGC CTTCTTTCGC
CAGGCCTACC GGCCCTATGG CTGGTTAAGC GACTCCGAGT GGCGCAAGCT CACCGAGACC
AGCGTGCGCC GCCTGCCCGA TGGCCGCGTC ACGCCGCACT ACGACCCGGC CATGATCGAG
CAGTTCACGG CCCATGACGA CGACTACGGC ATCTGGCCGC ACTACGACGC CCTGCAGATC
CCCGTGCTGC TGCTGCGGGG CGTGGACTCG GACCTGGTGC TGCCCGAGGT GGCCCGGGAA
ATGACCACGC GCGGCCCCGG CGCGCGCGGC CTGCTGCACT GGCAGGAGGT GCCTGGCTGC
GGCCATGCGC CGGCGCTGAA CGTGCCCGCG CACTGGCAAT GGGTGCTGGA GCATCTGCAG
CGCGGCTGA
 
Protein sequence
MASKASSSSA PVPASCYTQC AGYEIHYMDW QPAPDVAPAG TVVAWHGLAR TGRDMDALAQ 
FLAGQGWRVI CPDTPGRGLS QWSRAPREEY RLGFYARIAR GLFDALGLER AHWVGTSMGG
AIGTVCASGL FEPSLRARIA TLVLNDNAPQ LAESALARIR SYAGQPPAFD TVGELEAFFR
QAYRPYGWLS DSEWRKLTET SVRRLPDGRV TPHYDPAMIE QFTAHDDDYG IWPHYDALQI
PVLLLRGVDS DLVLPEVARE MTTRGPGARG LLHWQEVPGC GHAPALNVPA HWQWVLEHLQ
RG