Gene Daci_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2553 
Symbol 
ID5748122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2826600 
End bp2827349 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID641297641 
ProductABC transporter related 
Protein accessionYP_001563576 
Protein GI160897994 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.980288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG CCGCCAACCT CAACCCAAAC TCCAACCTGC TCGAACTGTC GGGCGTGCAC 
ACGCATATCG GGGCCTATCA CATCCTGCAT GGCGTGGACC TGGCCGTGCC GCGCGGTCAG
CTGACCATGC TGCTGGGGCG CAATGGCGCG GGCAAGACGA CCACGCTGCG CACCATCATG
GGTCTGTGGC GGGCCAGCCA GGGGCGCATC GCCTTTGGCG GGGCCGACAT CACGGCCCTG
CCTACGCCCG CGATTGCGCG GCTGAACATT GCCTATGTGC CCGAGAACAT GGGCATCTTC
GCGGACCTGA CGGTGCAGGA AAACCTGCTG CTGGCCGCGC GCGGCGCCTC GCGCGCCGAC
CGCATGGACG CGCAGCGGCT GCAGTGGATC TTCGGCATGT TCCCGGCCGT GGAGAAGTTC
TGGAACCACC CGGCCGGCAA GCTGTCGGGC GGGCAAAAGC AGATGGTGGC GGTGGCGCGC
GCCATCGTGG AGCCGCGTGA TCTGCTGATC GTGGACGAGC CCAGCAAGGG CCTGGCGCCA
GCCATCATCG AGAACATGAT CGCGGCCTTC GCGCAACTCA AGGCGGGCGG CACGACGATT
GTGCTGGTGG AGCAGAACCT GGGCTTTGCG CGCCGCCTGG GCGACCGCGT GGCGGTGATG
GACAACGGCC GCGTGGTGCA CGCGGGCGGC ATGGCCGAGT TCTCGGCAGA CGCGGCGTTG
CAGCAGTCGC TGCTGGGGCT TTCGCTATGA
 
Protein sequence
MSAAANLNPN SNLLELSGVH THIGAYHILH GVDLAVPRGQ LTMLLGRNGA GKTTTLRTIM 
GLWRASQGRI AFGGADITAL PTPAIARLNI AYVPENMGIF ADLTVQENLL LAARGASRAD
RMDAQRLQWI FGMFPAVEKF WNHPAGKLSG GQKQMVAVAR AIVEPRDLLI VDEPSKGLAP
AIIENMIAAF AQLKAGGTTI VLVEQNLGFA RRLGDRVAVM DNGRVVHAGG MAEFSADAAL
QQSLLGLSL