Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2530 |
Symbol | |
ID | 5748099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2803201 |
End bp | 2804733 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641297618 |
Product | putative sigma54 specific transcriptional regulator |
Protein accession | YP_001563553 |
Protein GI | 160897971 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCA CACCCACCCT GGTCCAGCCC CTGCCGCTCG ATGCCGACGG CATCCTCGCG CTGGCAGCGC GCTCCATGTT CCAGCTGTTC TCCACCATGA GCCAGGGCAT GTTCCTGGCC GACAGGGCGG GGCGCATCGT CTGGGTCAAC GAGGGCTACC AGCGCTTCCT GCCCGACCTG GGCGTGGCCT CGGTGGACGA CTTCCTGGGC CACATGGTCG AGGACGTCAT CCCCAACACC CGCATGCGCC GCGTGCTGGA AACCGGCGAG CCCGTACTCA TCGACCTGCT CACCAACCGC GCCGGCACCT TCGTGGTCAG CCGCATCCCG CTCAAGGACG ATGCGGGCGC GGTCATCGGT GCCATCGGCA TCGTGCTCTT CGACCAGCCG GAGACCACGC TGCAGCCCCT CATCAGCAAG TTCGCCGTTC TGCAGCGCGA CCTGGACGAG GCCCGGCGCG AGCTGGCCGC CCAGCGCAAC CGCAGCCTGC GCGTGGCCGT GCAGGGCGAG CGCCGCGCCA AGTACAGCTT TGCCAGCTTT GTCGGCAGCA GCCCGGCGGC CGTGGAGGTC AAGCGCCAGG CACGCCGCGC GGCCCAGTCG CTCAGCCCCG TGCTGCTGCT GGGCGAAACC GGCACCGGCA AGGAGCTGCT GGCCCATGCC ATCCACGCGG CATCGGCCCG CACCGGTGGC CCCTTCGTCA CCGTCAACAT CGCCGCCGTA CCGGATGCCT TGCTGGAGGC CGAGTTCTTC GGCGTTGCCC CCGGCGCCTA CACCGGTGCA GACCGCAAGC CGCGCGACGG CAAATTCAGG CTGGCCGACG GCGGCACGCT GTTCCTCGAC GAAATCGGCG ACATGCCCCT GAACCTGCAG GCCAAGCTGC TGCGCGCGCT GCAGGAGGGC GAGATCGAAC CGCTGGGCTC CAACCAGCTC GTGCGCTTTG ACGTGCGCGT GGTGGCAGCC ACCTCGCGCG ACCTGCCGCA GATGGTGCGT GACGGCCGCT TCCGGGAAGA CCTTTTCTAC CGCCTGCACG TGCTGCCCAT CCGCGTGCCG CCGCTGCGCG AACGCAGGCG CGACATCCCG GCCCTGGTCG AAGTCCTCTC CGAAGAACTG GCCCTGCGCA ACGACATGCC CCCGCCCGAA CTGCTGCCCG ACGCCCTGGC CCTGCTGGCC GGCCAGACCT GGCGCGGCAA CATCCGCGAG TTGCGCAACG TGCTGGAGCA GGCCGCCATG CGCAGCGAAG ACACCGCCAT CAACGCAGAG CAACTGCGCG AAGTGCTGCG CTCATCCGGC GTGGAACCCG CCGCACCCGC GCCCGGCCCC GAGACTGCGC TCGCCCCGTC TCCTGCCCAC AACAGCCCCG CCGACACCGA CCTGCTGCGC CCCCTGGCCC AGCAGGTGGC CGAACTGGAA CGCAAGGCCA TCACCGCCAC CCTGGCCGCC AACAGCGGCA ACAAACTGGC CACGGCGCGC CAGCTGGGCA TCTCGCGGGC CACGCTGTAT GACCGCATGG CGGTGCTGGA GCTGCAGGGC TGA
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Protein sequence | MPPTPTLVQP LPLDADGILA LAARSMFQLF STMSQGMFLA DRAGRIVWVN EGYQRFLPDL GVASVDDFLG HMVEDVIPNT RMRRVLETGE PVLIDLLTNR AGTFVVSRIP LKDDAGAVIG AIGIVLFDQP ETTLQPLISK FAVLQRDLDE ARRELAAQRN RSLRVAVQGE RRAKYSFASF VGSSPAAVEV KRQARRAAQS LSPVLLLGET GTGKELLAHA IHAASARTGG PFVTVNIAAV PDALLEAEFF GVAPGAYTGA DRKPRDGKFR LADGGTLFLD EIGDMPLNLQ AKLLRALQEG EIEPLGSNQL VRFDVRVVAA TSRDLPQMVR DGRFREDLFY RLHVLPIRVP PLRERRRDIP ALVEVLSEEL ALRNDMPPPE LLPDALALLA GQTWRGNIRE LRNVLEQAAM RSEDTAINAE QLREVLRSSG VEPAAPAPGP ETALAPSPAH NSPADTDLLR PLAQQVAELE RKAITATLAA NSGNKLATAR QLGISRATLY DRMAVLELQG
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