Gene Daci_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2530 
Symbol 
ID5748099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2803201 
End bp2804733 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content70% 
IMG OID641297618 
Productputative sigma54 specific transcriptional regulator 
Protein accessionYP_001563553 
Protein GI160897971 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCA CACCCACCCT GGTCCAGCCC CTGCCGCTCG ATGCCGACGG CATCCTCGCG 
CTGGCAGCGC GCTCCATGTT CCAGCTGTTC TCCACCATGA GCCAGGGCAT GTTCCTGGCC
GACAGGGCGG GGCGCATCGT CTGGGTCAAC GAGGGCTACC AGCGCTTCCT GCCCGACCTG
GGCGTGGCCT CGGTGGACGA CTTCCTGGGC CACATGGTCG AGGACGTCAT CCCCAACACC
CGCATGCGCC GCGTGCTGGA AACCGGCGAG CCCGTACTCA TCGACCTGCT CACCAACCGC
GCCGGCACCT TCGTGGTCAG CCGCATCCCG CTCAAGGACG ATGCGGGCGC GGTCATCGGT
GCCATCGGCA TCGTGCTCTT CGACCAGCCG GAGACCACGC TGCAGCCCCT CATCAGCAAG
TTCGCCGTTC TGCAGCGCGA CCTGGACGAG GCCCGGCGCG AGCTGGCCGC CCAGCGCAAC
CGCAGCCTGC GCGTGGCCGT GCAGGGCGAG CGCCGCGCCA AGTACAGCTT TGCCAGCTTT
GTCGGCAGCA GCCCGGCGGC CGTGGAGGTC AAGCGCCAGG CACGCCGCGC GGCCCAGTCG
CTCAGCCCCG TGCTGCTGCT GGGCGAAACC GGCACCGGCA AGGAGCTGCT GGCCCATGCC
ATCCACGCGG CATCGGCCCG CACCGGTGGC CCCTTCGTCA CCGTCAACAT CGCCGCCGTA
CCGGATGCCT TGCTGGAGGC CGAGTTCTTC GGCGTTGCCC CCGGCGCCTA CACCGGTGCA
GACCGCAAGC CGCGCGACGG CAAATTCAGG CTGGCCGACG GCGGCACGCT GTTCCTCGAC
GAAATCGGCG ACATGCCCCT GAACCTGCAG GCCAAGCTGC TGCGCGCGCT GCAGGAGGGC
GAGATCGAAC CGCTGGGCTC CAACCAGCTC GTGCGCTTTG ACGTGCGCGT GGTGGCAGCC
ACCTCGCGCG ACCTGCCGCA GATGGTGCGT GACGGCCGCT TCCGGGAAGA CCTTTTCTAC
CGCCTGCACG TGCTGCCCAT CCGCGTGCCG CCGCTGCGCG AACGCAGGCG CGACATCCCG
GCCCTGGTCG AAGTCCTCTC CGAAGAACTG GCCCTGCGCA ACGACATGCC CCCGCCCGAA
CTGCTGCCCG ACGCCCTGGC CCTGCTGGCC GGCCAGACCT GGCGCGGCAA CATCCGCGAG
TTGCGCAACG TGCTGGAGCA GGCCGCCATG CGCAGCGAAG ACACCGCCAT CAACGCAGAG
CAACTGCGCG AAGTGCTGCG CTCATCCGGC GTGGAACCCG CCGCACCCGC GCCCGGCCCC
GAGACTGCGC TCGCCCCGTC TCCTGCCCAC AACAGCCCCG CCGACACCGA CCTGCTGCGC
CCCCTGGCCC AGCAGGTGGC CGAACTGGAA CGCAAGGCCA TCACCGCCAC CCTGGCCGCC
AACAGCGGCA ACAAACTGGC CACGGCGCGC CAGCTGGGCA TCTCGCGGGC CACGCTGTAT
GACCGCATGG CGGTGCTGGA GCTGCAGGGC TGA
 
Protein sequence
MPPTPTLVQP LPLDADGILA LAARSMFQLF STMSQGMFLA DRAGRIVWVN EGYQRFLPDL 
GVASVDDFLG HMVEDVIPNT RMRRVLETGE PVLIDLLTNR AGTFVVSRIP LKDDAGAVIG
AIGIVLFDQP ETTLQPLISK FAVLQRDLDE ARRELAAQRN RSLRVAVQGE RRAKYSFASF
VGSSPAAVEV KRQARRAAQS LSPVLLLGET GTGKELLAHA IHAASARTGG PFVTVNIAAV
PDALLEAEFF GVAPGAYTGA DRKPRDGKFR LADGGTLFLD EIGDMPLNLQ AKLLRALQEG
EIEPLGSNQL VRFDVRVVAA TSRDLPQMVR DGRFREDLFY RLHVLPIRVP PLRERRRDIP
ALVEVLSEEL ALRNDMPPPE LLPDALALLA GQTWRGNIRE LRNVLEQAAM RSEDTAINAE
QLREVLRSSG VEPAAPAPGP ETALAPSPAH NSPADTDLLR PLAQQVAELE RKAITATLAA
NSGNKLATAR QLGISRATLY DRMAVLELQG