| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2520 |
|---|
| Symbol | |
|---|
| ID | 5748089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2789865 |
|---|
| End bp | 2791379 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641297608 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563543 |
|---|
| Protein GI | 160897961 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0500979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT TTGACGCACT GATGGCGGGC TTCGCCACCG CCATCACACC CGCCAACCTG
CTGTGGGCTC TGGTCGGCTG CGCCCTGGGT ACGGCCGTGG GCGTGCTGCC CGGCATCGGC
CCGGCCGTGG CCGTGGCCAT GCTGCTGCCC ATTACCGCCA AGGTCGAGGT CACCGCCTCG
ATGATCTTCT TCGCGGGCAT CTACTACGGC GCCATGTATG GCGGCTCCAC CACCTCCATC
CTGCTGAACA CGCCCGGGGA GACCGCGAGC ATGGTCACGG CCATGGAGGG CAACAAGATG
GCCAAGAGCG GCCGCGCGGG CGCCGCGCTG GCCACCTCCG CCATCGGCTC CTTCGTGGCC
GGCACCGTGG CCACCGTGGT CGTCACGCTG TTCGCGCCGT CGGTGGCCGA CTTTGCCGTC
AAGCTGGGCC CGCCCGAGTA CTTCATGCTG ATGGTGCTGG CCTTCACCAC CGTCAGTGCC
GTGCTCGGCC AAAGCGCGCT GCGCGGCATG ACGGCCCTGT TCCTGGGGCT GGCGCTGGGC
TGCATCGGCA TGGACCAGAT CTCGGGCGCT GCGCGCTACA CCATGGGCAA GATGGAACTG
CTGGACGGCG TGGACATCGT TCTCGTGGCC GTGGGCCTGT TCGCCGTGGC CGAGGTGCTG
TACGCCGCCA TGTACGAAGG CAAGGTCGTC GATACGCAAA ACAGGATGGG CCGCGTGCAC
ATGACCGGCC GCGACTGGAA GCGTTCGTGG CCCGCCTGGC TGCGCGGCAC CGTCATCGGC
ACACCCTTCG GCTGCATCCC TGCCGGCGGC ACCGAGATCC CCACCTTCCT GAGCTACGCC
ACCGAAAAGA AGCTGGCCAA GGGTGAGAAC CGTGCCGAGT TCGGCACCAA GGGCGCCATC
GAAGGCGTGG CCGGCCCCGA GGCCGCCAAC AACGCCACCG TGACCGCCGC GCTGATCCCG
CTGCTGACCC TGGGCATTCC CACCAGCAAC ACCACGGCCG TTCTGCTGGG CGCGTTCCAG
AACTACGGCA TCAACCCCGG CCCGCAGCTG TTCAGCTCGT CCGCCGCCCT GGTCTGGGCG
CTGATCGCCT CGCTGTACAT CGGCAACCTG ATGCTGCTGG TGCTCAACCT GCCCATGGTG
GGCTTGTGGG TCAAGCTGCT CAAGATCCCG CGTCCCCAGT TGTACGCAGG CATCCTGATC
TTCGCCACCG TGGGTGCCTA CGGCATGCGC CAGAGCGCCT TCGACCTGTT CCTGCTGTAC
GGCATCGGCG TGCTGGGCGT GATCATGCGC CGCTTCGACT TCCCCACCGC GCCCGTCGTG
GTCGGCATGA TCCTGGGCCC CCTGGCCGAG GCACAGATGC GCAATGCCGT GTCCATCGGC
GAAGGCAGCT GGTGGATCTT CCTGCAGCGC CCCATGTCGC TGACGCTGAT CATCATCGTG
GCCTGCGTGC TCATCGTGCC GCGCGTGCTC AAGCGCCTGC AGCCCAAGCC CTCGCCGGAG
GCGGCTGCCG GCTGA
|
|---|
| Protein sequence | MEIFDALMAG FATAITPANL LWALVGCALG TAVGVLPGIG PAVAVAMLLP ITAKVEVTAS
MIFFAGIYYG AMYGGSTTSI LLNTPGETAS MVTAMEGNKM AKSGRAGAAL ATSAIGSFVA
GTVATVVVTL FAPSVADFAV KLGPPEYFML MVLAFTTVSA VLGQSALRGM TALFLGLALG
CIGMDQISGA ARYTMGKMEL LDGVDIVLVA VGLFAVAEVL YAAMYEGKVV DTQNRMGRVH
MTGRDWKRSW PAWLRGTVIG TPFGCIPAGG TEIPTFLSYA TEKKLAKGEN RAEFGTKGAI
EGVAGPEAAN NATVTAALIP LLTLGIPTSN TTAVLLGAFQ NYGINPGPQL FSSSAALVWA
LIASLYIGNL MLLVLNLPMV GLWVKLLKIP RPQLYAGILI FATVGAYGMR QSAFDLFLLY
GIGVLGVIMR RFDFPTAPVV VGMILGPLAE AQMRNAVSIG EGSWWIFLQR PMSLTLIIIV
ACVLIVPRVL KRLQPKPSPE AAAG
|
|---|
| |