Gene Daci_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2515 
Symbol 
ID5748084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2785325 
End bp2785774 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID641297603 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001563538 
Protein GI160897956 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.165462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TCGAATCCAT GCGTCTGGAC AAATGGCTGT GGTGCGCGCG TTTCTACAAG 
ACGCGCAGCC TGGCGGTAGA AGAGATCGGC AAGGGCCGCA TCACCGTCAA CGGAGCCCTG
GTCAAGCCCG CGCGCGAGGT GCGCTGCGGC GACACCGTGG CGCTGCGCCA GGGCCAGATT
CCGCGCACCG TGGTCATTCG TGGCCTGTCC GGCATGCGCG GCCCCGCGCC TGTGGCCCAG
GCCCTGTACG AAGAAACCGC CGCAAGCCTG GCCGAGCGGG AGCGCCTGGC CGAGCAGCGC
CGGCTGGCGC CCGAGCCAGC CAGCAGCATT GCCGACCAGC ACGACGGCCG CCCCACCAAG
CGCGACCGCC GCCAGATCGA CCAAGTGCGC GAGCGCGGCA GCTGGGACAG CCGCTGGAGC
GCATCCATCG ACGACCTGGA CCGGCGCTGA
 
Protein sequence
MTDIESMRLD KWLWCARFYK TRSLAVEEIG KGRITVNGAL VKPAREVRCG DTVALRQGQI 
PRTVVIRGLS GMRGPAPVAQ ALYEETAASL AERERLAEQR RLAPEPASSI ADQHDGRPTK
RDRRQIDQVR ERGSWDSRWS ASIDDLDRR