Gene Daci_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2504 
Symbol 
ID5748067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2767637 
End bp2768143 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID641297586 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001563527 
Protein GI160897945 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.844269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.92014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC CCCAAGTCGA ACTCCACATC GCCGGCCACG GCGTCATCAC CATCGAACTC 
GACGCCGCCA AGGCCCCGAA GAGCGCAGAG AACTTCCTGG CCTATGTGAA CAAGGGCCAC
TACAACAACA CCATCTTCCA TCGCATCATC GATGGCTTCA TGATCCAGGG CGGCGGCTTC
GAGCCCGGCA TGAAGCAAAA GGAGACGGAC GCCCCCATCG AGAACGAGGC CAAGAACGGC
CTGAAGAACG ACAAGTACAC CCTGGCCATG GCCCGTACCG GCGACCCGCA CTCGGCCACC
GCCCAGTTCT TCATCAACGT GGCCGACAAC GGCTTCCTGA ACCACACCTC GCCCAGCGCC
CAGGGCTGGG GCTATGCCGT GTTCGGCAAG GTGGTCAAGG GCACCGAGAT CGTGGACAAG
CTGCGTGGCG TGAAGACCGG CCGCAACGGC GGCCACCAGG ACGTGCCCAA GGATGACGTG
ATCATCGAAA AGGCCGTGGC CCTGTAA
 
Protein sequence
MSNPQVELHI AGHGVITIEL DAAKAPKSAE NFLAYVNKGH YNNTIFHRII DGFMIQGGGF 
EPGMKQKETD APIENEAKNG LKNDKYTLAM ARTGDPHSAT AQFFINVADN GFLNHTSPSA
QGWGYAVFGK VVKGTEIVDK LRGVKTGRNG GHQDVPKDDV IIEKAVAL