Gene Daci_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2500 
Symbol 
ID5748063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2763917 
End bp2764672 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content69% 
IMG OID641297582 
Producthypothetical protein 
Protein accessionYP_001563523 
Protein GI160897941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.617054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCA TGTTTTTCAT CATCGCGCTG GGCGCGGCGG CGGCCGGATT CGTGCAGGGC 
CTGTCGGGCT TTGCCTTCGG CATGGTGGCC ATGTCGTTCT GGGCCTGGGT GCTGGAGCCG
CGCGATGCGG CCGTGCTCAC CGTCTTCGGC TCGCTGCTGG GCCAGGTGCT GTCGGCCATC
ACCGTGCGGC GCGGGTTTGC GCTGGCAAAG CTGCTGCCCT TCATCCTGGG CGGTCTTGCC
GGCATTCCGC TGGGCGTCTT GCTGCTGCCG CACCTGGACA TGGCCTGGTT CAAGGCCCTG
CTGGGCGGCA TGCTGGTGCT GTGGTGCCCG GTAATGCTGC TGTCGGCCCG GCTGCCCAGG
CTGGCGCGCG GCGGCCAGGT GGCAGACGGC GCCGTGGGCC TGGCGGGCGG CGTGATGGGC
GGACTGGGCG GCTTCACGGG CACGCTGCCC ACGCTGTGGT GTACGCTGCG CGGCTACCCC
AAGGATGAGC AGCGCTCCGT CATCCAGAAC TTCAACCTGT CCATGCTGGC CGTGACCATG
GCCACCTACC TGGGCACCGG CATGGTCACG CGCAGCATGC TGCCGCTGTT CGCCATCGTG
GCGCCGGCCA TGCTCATTCC ATCGCTGCTG GGCTCCAGGC TCTATATCGG TATCAGCGAG
GCACGGTTCC GGCAGATCGT GCTGGGCCTG CTGTGCCTGT CCGGCGTGGC GCTGCTGGTC
TCCTCGGTGC CGGTGCTGCT GCAGCGAGCG GGCTGA
 
Protein sequence
MDGMFFIIAL GAAAAGFVQG LSGFAFGMVA MSFWAWVLEP RDAAVLTVFG SLLGQVLSAI 
TVRRGFALAK LLPFILGGLA GIPLGVLLLP HLDMAWFKAL LGGMLVLWCP VMLLSARLPR
LARGGQVADG AVGLAGGVMG GLGGFTGTLP TLWCTLRGYP KDEQRSVIQN FNLSMLAVTM
ATYLGTGMVT RSMLPLFAIV APAMLIPSLL GSRLYIGISE ARFRQIVLGL LCLSGVALLV
SSVPVLLQRA G