Gene Daci_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2476 
Symbol 
ID5748039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2736222 
End bp2737418 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content69% 
IMG OID641297558 
Productamidohydrolase 
Protein accessionYP_001563499 
Protein GI160897917 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.738512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.674601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCA CACCCGACAT CACCCCCCAC CTCGGCTCCC TGCTGAAGTT CCGCCACGAC 
CTGCATGCCA ACCCCGAGTT GCGCTACGAG GAGCACCGCA CCGGCGACAA GGTGGCGGCC
TACCTGATGG CGCTGGGGCT GCAGGTGCAC CGCGGGCTGG GCAGGACCGG CGTGGTGGCA
AGCATCCACG GCCGGGGGCG CAGCGCCGCC AACCCGGGCC GCAGCATCGG CATACGGGCC
GACATGGATG CGCTGCCGGT GACGGAGCTC AACGCCTTCG GCCACGCCAG CCAGAACCCG
GGCTGCATGC ACGCCTGCGG CCATGACGGC CACACGACCA TGCTGCTGGG CGCGGCCACG
CTGCTGGCGC AGCAGCCGGA TTTCGATGGA TCGGTGCACC TGATCTTCCA GCCCGCCGAG
GAAGGCGGCG CAGGCGCCAA GGCCATGATG GAGGACGGCC TGTTCGACCG CTTCCCCTGC
GAGGCCGTGT TTGCGCTGCA CAACTGGCCT GCACTGCCTG CCGGCGAGAT GGCGGTGCGC
GTCGGGCCCA TCATGGCCTC CACGCTGCGT TTCGAGATCC GCGTGCACGG CAAGGGCGGC
CACGCGGCCA TGCCCCACAC CACGCTGGAC CCGATTCCCG TGGCCTGTGC CATCGTCGGC
CAGTTGCAGA CCCTGGTGTC GCGCAGCACC GATCCGCTGG ACAGCGCCGT GCTCACCGTG
GGCAAGATCA CCAGCGGCAC GGTGGAGAAC ATCATTCCTG ACGAGGCCAG CATCTTCGGC
ACGGTGCGCG CGCTCAGGAC CGAGACGCAG CAGATGTTCA TCGAAGGCAT GCAGCGCATC
AGCGAGCATG TGGCGGCCGC CCATCTGTGC CGCGCCGAAT TCATTCTCAA GCCCGGCTAT
CCCAACACCA CCAACCACGC GCACGAGGCC CGCTTCATGG CCGAGGTGAT GCGCGAGGCG
GTGGGCGAGG ACCGCACCCA CGCCGACATC CTGCCGGCCA TGACGGCAGA GGACTTCGGC
TTCATGCTGG AGGCCGTGCC CGGCGCCTAT GGCTGGATAG GCAACGGCCC CGCCACGGGC
GAGCCCGGCG TGGGCCTGCA CAACCCCGGC TACGACTTCA ACGACGACAA CCTGGGGCGC
GGCGCACGCT TCTGGGATCT GCTGGCGCGC CGCTGGCTGG AACAGTCCAG GACCTGA
 
Protein sequence
MRSTPDITPH LGSLLKFRHD LHANPELRYE EHRTGDKVAA YLMALGLQVH RGLGRTGVVA 
SIHGRGRSAA NPGRSIGIRA DMDALPVTEL NAFGHASQNP GCMHACGHDG HTTMLLGAAT
LLAQQPDFDG SVHLIFQPAE EGGAGAKAMM EDGLFDRFPC EAVFALHNWP ALPAGEMAVR
VGPIMASTLR FEIRVHGKGG HAAMPHTTLD PIPVACAIVG QLQTLVSRST DPLDSAVLTV
GKITSGTVEN IIPDEASIFG TVRALRTETQ QMFIEGMQRI SEHVAAAHLC RAEFILKPGY
PNTTNHAHEA RFMAEVMREA VGEDRTHADI LPAMTAEDFG FMLEAVPGAY GWIGNGPATG
EPGVGLHNPG YDFNDDNLGR GARFWDLLAR RWLEQSRT