Gene Daci_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2471 
Symbol 
ID5748034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2730647 
End bp2732176 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content67% 
IMG OID641297553 
Productglutamate--cysteine ligase 
Protein accessionYP_001563494 
Protein GI160897912 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2918] Gamma-glutamylcysteine synthetase 
TIGRFAM ID[TIGR01434] glutamate--cysteine ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.257873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAT CGCAGGCATC CATGGCGGTT CCCGATCCCC AGCGGCTCAA GGGCATACGC 
CGTGGCATAG AAAAGGAGGG CCTGCGCGTG CTGCCTTCCG GCAGCCTGGC GCTGACGCCG
CATCCCCTGG CACTGGGCTC GGCGCTCACG CATCCGCACA TCACCACCGA CTACAGCGAA
TCGCAGATCG AGCTGATCAC GGGCGCGCGC CTGGGCGTGC AGGAATGCCT GGACGAGCTG
GTGCAGATCC ACCAGTTCGT GCTGCGCAGC CTGCGCGATG CGGGCGGCGA GATGCTGTGG
TCGTCCAGCA TGCCCTGCCA GTTGCCCACG GACGAGACGA TTCCGCTGGC GCGCTATGGC
TCCTCGCATT CGGGCCGATC CAAGAGCGTG TACCGCATGG GCCTGGGCCA TCGCTACGGC
CGGCGCATGC AGACGATTTC GGGCATCCAC TACAACTGGT CGCTGCCCGG CGTGACCAGC
GACCAGTATT TCTCGCTGAT CCGCAATTTC CGGCGCCATG CCTTCGTGCT GCTGTATCTG
TACGGCGCAT CGCCCGCGCT GTGTCCCTGT TTCGTCGAGG GGCGCGAGCA TGGTCTGAAG
CCGCTGGGCA ATACGGGCCA GGCGCTGTAC CTGCCCCATG CCACCTCGCT GCGCATGGGC
CGCCTGGGCT ACCAGAGCGA TGCGCAGGCC AGCATCAACG TCAGCTACAA CGGCCTGGAA
GGCTATGCGA ATTCGCTGCA TGAGGCGCTG ACCCATCCCT ACCCGGCCTA CGAGATGCTG
GGCGTGCGCA ATCCGGGCGG CGACTACAAC CAGCTGGGCA CGGGTCTGCT GCAGATCGAG
AACGAGTTCT ACGGCACCAT CCGCCCCAAG CGCACCGTCA GCCGTGGCGA GCGCCCGCTG
CATGCCCTGC GCGAGCGCGG CGTGGAGTAT GTGGAAGTGC GCCTGATGGA CCTCGATCCC
TTCGAGGATG TGGGCATTGC CGCCCCCACC ATGCGCATGC TGGACGTGTT CCTGCTGCAC
TGCCTGAATG CCGACAGCCC GCCCGATACG CCGGCCGAGA TCGCCGAACT CAAGCACAAC
CAGCACCTGA CCGCCGAGCG TGGCCGCGAG CCCGGCCTGC AGCTGGTGCG CGCGGGCCGC
GAGGTGCCGC TGCGCGACTG GGCCCATGAA GTGCTGGACC AGTGCCGCCC CTATGCCCAG
GCGCTGGACA GCACGCACGG CACGCACGAT TACAGTGCCG CGCTGGCCCA GGCGCTCGAG
CGCCTGGAGC ATCCCGAGCG CACGCCGTCG GCCCATGTGC TGGGCGAGCT GACGGGCGAG
TACGGCAACA GCTTCTCGCG CTTCACGCTG GCCCGTTCCG AGAAGGCCCG CGATTCGCTG
CTGGCCCTGC CCTGGAGCCA GGCGCAGCAG CAGCGCTTCG AGCAATGGTC GGCGCAGTCC
GTGCAGGACC AGCGCGACAT CGAGGCCGCG GACACGCTGT CCTTCGAGGA ATGGCGCCTG
CGCTACATGT CGCCCGAGAA CCTGCGCTGA
 
Protein sequence
MKTSQASMAV PDPQRLKGIR RGIEKEGLRV LPSGSLALTP HPLALGSALT HPHITTDYSE 
SQIELITGAR LGVQECLDEL VQIHQFVLRS LRDAGGEMLW SSSMPCQLPT DETIPLARYG
SSHSGRSKSV YRMGLGHRYG RRMQTISGIH YNWSLPGVTS DQYFSLIRNF RRHAFVLLYL
YGASPALCPC FVEGREHGLK PLGNTGQALY LPHATSLRMG RLGYQSDAQA SINVSYNGLE
GYANSLHEAL THPYPAYEML GVRNPGGDYN QLGTGLLQIE NEFYGTIRPK RTVSRGERPL
HALRERGVEY VEVRLMDLDP FEDVGIAAPT MRMLDVFLLH CLNADSPPDT PAEIAELKHN
QHLTAERGRE PGLQLVRAGR EVPLRDWAHE VLDQCRPYAQ ALDSTHGTHD YSAALAQALE
RLEHPERTPS AHVLGELTGE YGNSFSRFTL ARSEKARDSL LALPWSQAQQ QRFEQWSAQS
VQDQRDIEAA DTLSFEEWRL RYMSPENLR