Gene Daci_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2462 
Symbol 
ID5748025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2723199 
End bp2723624 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID641297544 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001563485 
Protein GI160897903 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0870388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.859311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG TAGCCTCGCG CGGCGGCCGC AGCCGCCGCA CCGTCAACGA GATCAACATG 
GTGCCCTTCA TCGACGTGAT GCTGGTGCTG CTCATCATCT TCATGGTGAC GGCCCCCATG
CTCACGCCGG GCTCCATCAA CGTGCCCAGC GCCGGCAAGG CCGCGCGCAC GCCCCCGAAG
CGCGCCGACG TGATGATCGA CAAGGACGGC GGCATCCGCA TCAAGGCCGG CAGCACCGAC
AAGACCGTCA CGCTCAAGGA GCTGGGCGCA GCCGCCAGGA GCTGGCAGGA CCAGCAAAGC
GACGACAGCG CCGTGCTGAT TTCGGCGGAC AAGAAGCTGC CCTTCGAGAC CGTGATGGCC
GCCATGTCGG CCCTGCAGTC GGCCGGCGTC AAGCGCGTGG CCTTCGGCGT CAAGTCCTCC
CAGTAA
 
Protein sequence
MPAVASRGGR SRRTVNEINM VPFIDVMLVL LIIFMVTAPM LTPGSINVPS AGKAARTPPK 
RADVMIDKDG GIRIKAGSTD KTVTLKELGA AARSWQDQQS DDSAVLISAD KKLPFETVMA
AMSALQSAGV KRVAFGVKSS Q