Gene Daci_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2460 
Symbol 
ID5748023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2720480 
End bp2721634 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID641297542 
Productrelease factor H-coupled RctB family protein 
Protein accessionYP_001563483 
Protein GI160897901 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03073] release factor H-coupled RctB family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATT CCCTTTCGGA CACCTACATT GAGGTGTTCG CCAACCGCGG CGTCTGGATT 
GAAGACGCCG CCATCCAACA ACTTCAAACA ACGGCCCGCA ACCTGGCCGG CATGCGCGCA
GCCGTGGGCC TGCCCGACCT GCACCCGGGC CGGGGCTACC CGGTAGGGGC GGCCTTCTTT
TCCGTGGGCC GCTTCTACCC GGCCCTGGTC GGCGGCGACA TCGGCTGCGG CATGTCGCTG
TACAGCACGG AGCTGGCAGC GCACAAGACC TCGGCCCCCA AGCTGGAAAA GGCGGTGGGC
AACATCGACG GCCCCCTGCC CCAGGAACTG CTGGACGCCG TGGACATGCA GCGGCTGGAG
CACATCGCCC AGGCCAGCGG CGTGGCCGAC CTGGCGTATC TGCAGGACAG CCTGGGCACC
ATTGGCGGCG GCAACCACTT TGCCGAACTG CAGGTGGTGG ACACGCTGTA CGAGGACGGC
GCGCTCGACA GGAAACGCGT GCACCTCATG GTGCACAGCG GCTCGCGCGG GCTGGGCGGC
GCCATCCTGC GCGCCCATGT GGAGGCCTTC AGCCACGACG GCCTGGCCGC CAGCAGCAAT
GCCGCCACGC AGTACCTGCG CCAGCACGCG GCCGCCATCG CCTTTGCCCA GCTCAACCGC
GCCAGCATTG CGGCACGCCT GCTGCGCGCC CTGCGCACGC GCGGCCAGGC CCTGCTGGAC
ATCACCCACA ACCACGTGAT CGCCCACCAC TGGCGCGGCG AGGATGGCTT TTTGCACCGC
AAGGGCGCCA CGCCGGCCGA CCAGGGTCTG GTGGTGATCC CGGGTTCGCG CGGCGACTAC
AGCTACCTCG TGCGGCCCGT GGCCGGGCGT GACGAGGCAC TGCACTCGCT GGCACACGGC
GCAGGCCGCA AGTGGGCACG CACCGATTGC ATGGGCCGCC TGCGCCCGCG CTTCACGCTG
GACGAACTGC TGCGCACAAA ATTCGGCAGC GCCGTGGTCT GCGCCGACCG CGAACTGGTC
TACGAGGAGG CCCCCCAGGC CTACAAGGAC GTGGACTCCG TGGTCGCCAG CCTGCAGGAA
GCCGGTCTGG TGCAACTGGT GGCGCGGCTG CGCCCCCTGC TGACCTACAA GAAGGGAGCC
ATGCAATGCT GCTGA
 
Protein sequence
MGNSLSDTYI EVFANRGVWI EDAAIQQLQT TARNLAGMRA AVGLPDLHPG RGYPVGAAFF 
SVGRFYPALV GGDIGCGMSL YSTELAAHKT SAPKLEKAVG NIDGPLPQEL LDAVDMQRLE
HIAQASGVAD LAYLQDSLGT IGGGNHFAEL QVVDTLYEDG ALDRKRVHLM VHSGSRGLGG
AILRAHVEAF SHDGLAASSN AATQYLRQHA AAIAFAQLNR ASIAARLLRA LRTRGQALLD
ITHNHVIAHH WRGEDGFLHR KGATPADQGL VVIPGSRGDY SYLVRPVAGR DEALHSLAHG
AGRKWARTDC MGRLRPRFTL DELLRTKFGS AVVCADRELV YEEAPQAYKD VDSVVASLQE
AGLVQLVARL RPLLTYKKGA MQCC