| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2450 |
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| Symbol | |
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| ID | 5748013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2707160 |
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| End bp | 2709136 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297532 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001563473 |
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| Protein GI | 160897891 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGGCG GCGACTCCCG GGCGACACGA TCTGGTGTAA ATGCTCATAG GGAAATCCGC
AGACCCCGCT ATGGTGGGCG GCTGTTTTCC GTCCCGCGTA TGAACCAGAA ACCTGCCTCC
CCCGACAACG TCTTTTCCGA GTCCAGCGCC TCCGCATCGC TGGCCGCCTC CACCGCCACA
ACCAGCACCA CCGGCAGCAG CCCGGCAGCG GCCACGCCCA AGCCCACGCC CAAGCCCACG
CCCAAGCCCA CGCCCTTTCG CTCCGCCCTG ATCCGCTCCG GCACCATCCG TGCCACCACG
CGCAGCTTCC TGCATGCCCT GGGCCAGGAC GACGAAGACA TAGAGCGCCC GCACATCGGC
GTGTTCCACA CGGGCGGGGA GATGAGCCCC TGCAACCTCA ACCTGCGCGA CCAGGCCCAG
CATGCCAAGA CCGGCATCTA TGCCGGGGGC GGTACGCCGC ATGAATGCCC GGTGGTGTCG
GTCAGCGACG GGCTGACCAT GGCGCATTCG GGCATGCGGT TTTCGCTGGT CTCGCGCGAG
TTGATCGCCG ACAGCGTGGA GGCCTCGGTG CGCGGCCACC AGTGGGATGG CATCTTCGCC
ATCGGCGCCT GCGACAAGAA CCTGCCGGGG CTGATGATGG GCATGGTGCG CTGCAATGTG
CCCAGCGTCT TCGTGCATGG CGGCTCGGCC CTGCCGGGGC AGGCGCCCGG CGTGCACGGG
CGCGACCTGA ACGTGGTCGA TACCTACGAG ACCATCGGCC AGGTGCTGGC CGGCACCGCC
ACGGCGCAGG ACCTGGAGGC CATGAGCCGC GCCTGCCTGC CCACGGCCGG CGCCTGCGCA
GGCCAGTTCA CGGCCAACAC CATGGGCATG GTGAGCGAGG CGCTGGGCCT GGCGCCCATC
GGCTCCAGCA TGGTGCCCGC CGTGTTCAGC GAGCGCGCAC CGCTGATGCG CCGCGCCGCG
CGCCAGCTCA TGCAGGCCGT GTGGGCCAGC GCCGAAGGCG GCGGCCCGCT GCCGCGCGAC
ATCATCACGC GCCGGGCGCT GGAGAATGCC TGCGCCGTGG TCAGCGCCAC GGGCGGATCG
ACCAATGCCG CCCTGCACCT GCCGGCCATC GCGCATGAGG CCGGCATCCG CTTCCACCTG
GACGACGTGG CCGAGATCTT CGCGCGCACG CCGCTGATCG CCGACCTGCG TCCCGGCGGG
CGCTTCCTGG CGCGCGATGT GTACTACATC GGCGGCGCCG GCGTGATCCT GCGCACGCTG
ATGGAGCAGG GCTTTGTCCA CGGCGATGCA CTCACCTTCA CGGGCCGCAC CCTGGCTGAA
GAACTGGCCG ATGCCGCGCC GCCCGATGGC GAGGTGGTGC GCACGCCCGG CAATCCCATC
ACGCGCGACG GTGGCCTGAC CGTGCTCAAG GGCAACCTCT GCCCCGATGG CGCGTTGCTG
AAGACGGCCG GCCTCAAGAC CCTGGTGCAC CGGGGCCCCG CGCGCGTCTT CGAGTCCGAG
GAACAGGCCC AGGCCGCCGT GCAGGCCATG CAGTACGCGG CCGGCGATGT CATCGTCATC
CGCAACGAAG GCCCGCGCGG CAGCCCCGGC ATGCGCGAGA TGCTGGGCAT CACCGCGCTG
CTGTATGGCC AGGGCATGGG CGACAAGGTG GCCCTGCTGA CCGATGGGCG CTTCTCTGGT
GCCACGCGCG GCCTGTGCAT CGGCTACGCA GGCCCCGAGG CCGCCGACAA CGGCCCCATT
GCCGCGCTGC GCGACGGCGA CCTCATCGCC ATCGACGCCC GCGCCGATGC GCGCAGCATC
ACGGTGGAAA TCGGCGAGGC GGAACTGGCC GCACGCCTGG AACAATCGGC CGCCGCGCGC
CGCCAGGCCC CGCCGCTGGG CGGCGTGCTG GAAAAATACG CGCTCACCGT GCGCCCGGCC
CACCAGGGCG CGGTCACGCA TTCGGGCCAG GTGGTCTGGC TGCGCGACGA CAGTTGA
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| Protein sequence | MQGGDSRATR SGVNAHREIR RPRYGGRLFS VPRMNQKPAS PDNVFSESSA SASLAASTAT
TSTTGSSPAA ATPKPTPKPT PKPTPFRSAL IRSGTIRATT RSFLHALGQD DEDIERPHIG
VFHTGGEMSP CNLNLRDQAQ HAKTGIYAGG GTPHECPVVS VSDGLTMAHS GMRFSLVSRE
LIADSVEASV RGHQWDGIFA IGACDKNLPG LMMGMVRCNV PSVFVHGGSA LPGQAPGVHG
RDLNVVDTYE TIGQVLAGTA TAQDLEAMSR ACLPTAGACA GQFTANTMGM VSEALGLAPI
GSSMVPAVFS ERAPLMRRAA RQLMQAVWAS AEGGGPLPRD IITRRALENA CAVVSATGGS
TNAALHLPAI AHEAGIRFHL DDVAEIFART PLIADLRPGG RFLARDVYYI GGAGVILRTL
MEQGFVHGDA LTFTGRTLAE ELADAAPPDG EVVRTPGNPI TRDGGLTVLK GNLCPDGALL
KTAGLKTLVH RGPARVFESE EQAQAAVQAM QYAAGDVIVI RNEGPRGSPG MREMLGITAL
LYGQGMGDKV ALLTDGRFSG ATRGLCIGYA GPEAADNGPI AALRDGDLIA IDARADARSI
TVEIGEAELA ARLEQSAAAR RQAPPLGGVL EKYALTVRPA HQGAVTHSGQ VVWLRDDS
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