Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2446 |
Symbol | |
ID | 5748009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2701992 |
End bp | 2703647 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641297528 |
Product | hypothetical protein |
Protein accession | YP_001563469 |
Protein GI | 160897887 |
COG category | [S] Function unknown |
COG ID | [COG4929] Uncharacterized membrane-anchored protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.78808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG AATACGACAC CCTGCTGCGC CAGGCCGTGG ACCAGGGCAT CCTGCCGCCT GCCGCCTTGC AGGACCGCCG CCCTGCCGCC AGCGACCGCC ATTGGGCGGT GGTGCTGCTC ACGGCGCTGG GCGCCTGGCT GGCCCTTCTG CCCTTGCTGA TTCTGTTTGC GTTTGCCCTG TCAGACTGGA TAGAGCGCGG CGCCGGCACC TATGTGATCG GCGCCATGAT GCTGGCCGCA GCCGTGGCCG TGCTGCGCGC CGAGGAGCTG CCCGTCTTCC TGGAGCAGCT GGCCCTGCCT GCCATGCTGA CCGGCGCCGG CCTGCTGGGC TTTGGCTTGG CGCGCGACCT GTCGGGGCAG GCTGCGGGCG CGATAGGCCT GGCCATTGCG CTGGCCTGCA CGGCCGCCAT TCCAAGGCCC TGGCTGCGCG TGCTGCTGGG CGCCGCCTGC GCGCTGCTGT TTTGCACCAT GCTCTGGCCG GACAACGATC CATCCACCCT GTACGCAGGC CTGCCGACCT GGGTCATCGT GCATGCGGCG CTGCTGCTCT GGATGCTGCT GCTGGCAGCC CAGTGGCGCG CGCTGGGGCA GTCTGCGGCA CAGACCCGCA TGGCGGCGGC GCTGGAGCCC TTTGCCACGG GCTGGCTGCT GGCGGTGCTG GCTGGCCTGG CCTTTCTGTC CGGAAGGAGC TTCATGGTGG CCGGCGCGCT GGGCGGCGGC CTGGCGGGCG AGCTGGCGCA GGAAGCCGCC CCGAACATCT CCATGGGCGT TCTGACGCAG GCCGGCTCGG CCGTGCTGGC CCTGGCAGCC GCCTGGTTCG CCCAGCGCGC ATGGCCCACG CTGCGGCAGC CGCGCGCCGC CGTGGCTGCC GTGGTGCTGG CCGTGCTGAG TGCCTTCCTG CCCTGGCTGG GCGCCTGCCT GCTGGCGCTG GCGGTGACCG GCACCAGCGG CCGCTGGCGG CAGGCCGCAG CGGCCGCCCT GGCTGCGGCC TGGATCGTGG GCAGCTTCTA CTACCAGCTG GCCTGGCCAT TGGCGACGAA GGCCATGGTG CTGGCCGGCT GCGGCGCCTT GCTGGGCCTG CTGGCCTGGG CAGGGCCGCG CGCCGCAGCC CTGCCAGGCA GCGCGGAGAC CGCCGCCGCA TCGGGCGCCG TGCCCCTGCA GCGCTGGGCG CCGTGGCTGG TGGTGCTGAC GGCGGCCTGC ACGCTGGCGG TGGCCAATAT CGGCATTGCG CAGAAGGAGC GCACCATCGC CCAGGGCCGC AAGGTGTTCG TGGAACTGGC GCCGGTGGAC CCGCGCTCCC TGATGCAGGG CGACTACATG CGCCTGAACT TCCGCCTGCC TTCCGAGGAC AGGGACGTGG AGAAAGAGAA CCTGCGCAGC GGACGCCTCT ACGCCATCGG CAAGCTCGAT GAGCAGGGCG TGGTGCAGTG GCTGCGCACC GGCACGGCCA GCGAGCCGCT GGCGCCCGGC GAGCAGCGCT TTGAACTCAC CCCGCGCGGC GGCCGGTGGA CGCTGGTGAC CGATGCCTGG TACTTCCGCG AAGGCGATGG CCAGCGCTGG GAGCAGGCCC GCTACGGCGA GTTCCGCGTG GAGCCCGACG GGCGTGCGCT GCTGGTGGGC ATGGCCGATG CGCAACTGCG CCCCATCGTG CCCTGA
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Protein sequence | MSHEYDTLLR QAVDQGILPP AALQDRRPAA SDRHWAVVLL TALGAWLALL PLLILFAFAL SDWIERGAGT YVIGAMMLAA AVAVLRAEEL PVFLEQLALP AMLTGAGLLG FGLARDLSGQ AAGAIGLAIA LACTAAIPRP WLRVLLGAAC ALLFCTMLWP DNDPSTLYAG LPTWVIVHAA LLLWMLLLAA QWRALGQSAA QTRMAAALEP FATGWLLAVL AGLAFLSGRS FMVAGALGGG LAGELAQEAA PNISMGVLTQ AGSAVLALAA AWFAQRAWPT LRQPRAAVAA VVLAVLSAFL PWLGACLLAL AVTGTSGRWR QAAAAALAAA WIVGSFYYQL AWPLATKAMV LAGCGALLGL LAWAGPRAAA LPGSAETAAA SGAVPLQRWA PWLVVLTAAC TLAVANIGIA QKERTIAQGR KVFVELAPVD PRSLMQGDYM RLNFRLPSED RDVEKENLRS GRLYAIGKLD EQGVVQWLRT GTASEPLAPG EQRFELTPRG GRWTLVTDAW YFREGDGQRW EQARYGEFRV EPDGRALLVG MADAQLRPIV P
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