Gene Daci_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2446 
Symbol 
ID5748009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2701992 
End bp2703647 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content72% 
IMG OID641297528 
Producthypothetical protein 
Protein accessionYP_001563469 
Protein GI160897887 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.78808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG AATACGACAC CCTGCTGCGC CAGGCCGTGG ACCAGGGCAT CCTGCCGCCT 
GCCGCCTTGC AGGACCGCCG CCCTGCCGCC AGCGACCGCC ATTGGGCGGT GGTGCTGCTC
ACGGCGCTGG GCGCCTGGCT GGCCCTTCTG CCCTTGCTGA TTCTGTTTGC GTTTGCCCTG
TCAGACTGGA TAGAGCGCGG CGCCGGCACC TATGTGATCG GCGCCATGAT GCTGGCCGCA
GCCGTGGCCG TGCTGCGCGC CGAGGAGCTG CCCGTCTTCC TGGAGCAGCT GGCCCTGCCT
GCCATGCTGA CCGGCGCCGG CCTGCTGGGC TTTGGCTTGG CGCGCGACCT GTCGGGGCAG
GCTGCGGGCG CGATAGGCCT GGCCATTGCG CTGGCCTGCA CGGCCGCCAT TCCAAGGCCC
TGGCTGCGCG TGCTGCTGGG CGCCGCCTGC GCGCTGCTGT TTTGCACCAT GCTCTGGCCG
GACAACGATC CATCCACCCT GTACGCAGGC CTGCCGACCT GGGTCATCGT GCATGCGGCG
CTGCTGCTCT GGATGCTGCT GCTGGCAGCC CAGTGGCGCG CGCTGGGGCA GTCTGCGGCA
CAGACCCGCA TGGCGGCGGC GCTGGAGCCC TTTGCCACGG GCTGGCTGCT GGCGGTGCTG
GCTGGCCTGG CCTTTCTGTC CGGAAGGAGC TTCATGGTGG CCGGCGCGCT GGGCGGCGGC
CTGGCGGGCG AGCTGGCGCA GGAAGCCGCC CCGAACATCT CCATGGGCGT TCTGACGCAG
GCCGGCTCGG CCGTGCTGGC CCTGGCAGCC GCCTGGTTCG CCCAGCGCGC ATGGCCCACG
CTGCGGCAGC CGCGCGCCGC CGTGGCTGCC GTGGTGCTGG CCGTGCTGAG TGCCTTCCTG
CCCTGGCTGG GCGCCTGCCT GCTGGCGCTG GCGGTGACCG GCACCAGCGG CCGCTGGCGG
CAGGCCGCAG CGGCCGCCCT GGCTGCGGCC TGGATCGTGG GCAGCTTCTA CTACCAGCTG
GCCTGGCCAT TGGCGACGAA GGCCATGGTG CTGGCCGGCT GCGGCGCCTT GCTGGGCCTG
CTGGCCTGGG CAGGGCCGCG CGCCGCAGCC CTGCCAGGCA GCGCGGAGAC CGCCGCCGCA
TCGGGCGCCG TGCCCCTGCA GCGCTGGGCG CCGTGGCTGG TGGTGCTGAC GGCGGCCTGC
ACGCTGGCGG TGGCCAATAT CGGCATTGCG CAGAAGGAGC GCACCATCGC CCAGGGCCGC
AAGGTGTTCG TGGAACTGGC GCCGGTGGAC CCGCGCTCCC TGATGCAGGG CGACTACATG
CGCCTGAACT TCCGCCTGCC TTCCGAGGAC AGGGACGTGG AGAAAGAGAA CCTGCGCAGC
GGACGCCTCT ACGCCATCGG CAAGCTCGAT GAGCAGGGCG TGGTGCAGTG GCTGCGCACC
GGCACGGCCA GCGAGCCGCT GGCGCCCGGC GAGCAGCGCT TTGAACTCAC CCCGCGCGGC
GGCCGGTGGA CGCTGGTGAC CGATGCCTGG TACTTCCGCG AAGGCGATGG CCAGCGCTGG
GAGCAGGCCC GCTACGGCGA GTTCCGCGTG GAGCCCGACG GGCGTGCGCT GCTGGTGGGC
ATGGCCGATG CGCAACTGCG CCCCATCGTG CCCTGA
 
Protein sequence
MSHEYDTLLR QAVDQGILPP AALQDRRPAA SDRHWAVVLL TALGAWLALL PLLILFAFAL 
SDWIERGAGT YVIGAMMLAA AVAVLRAEEL PVFLEQLALP AMLTGAGLLG FGLARDLSGQ
AAGAIGLAIA LACTAAIPRP WLRVLLGAAC ALLFCTMLWP DNDPSTLYAG LPTWVIVHAA
LLLWMLLLAA QWRALGQSAA QTRMAAALEP FATGWLLAVL AGLAFLSGRS FMVAGALGGG
LAGELAQEAA PNISMGVLTQ AGSAVLALAA AWFAQRAWPT LRQPRAAVAA VVLAVLSAFL
PWLGACLLAL AVTGTSGRWR QAAAAALAAA WIVGSFYYQL AWPLATKAMV LAGCGALLGL
LAWAGPRAAA LPGSAETAAA SGAVPLQRWA PWLVVLTAAC TLAVANIGIA QKERTIAQGR
KVFVELAPVD PRSLMQGDYM RLNFRLPSED RDVEKENLRS GRLYAIGKLD EQGVVQWLRT
GTASEPLAPG EQRFELTPRG GRWTLVTDAW YFREGDGQRW EQARYGEFRV EPDGRALLVG
MADAQLRPIV P