| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2428 |
|---|
| Symbol | |
|---|
| ID | 5747991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2682749 |
|---|
| End bp | 2683537 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641297510 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001563451 |
|---|
| Protein GI | 160897869 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.775504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCC TGCCTCCCCT CGCCTCAGAC AACGCTGCCC CCACCATCGG CGCGGGCGCA
TCGACCCCGG CCTTCAGCCC TTTGTATCAG CAGATCAAGG GACTGATACT GCAGAGCCTT
GAAGCAGGCG AATGGCGGCC CGGCGAACTG ATTCCCAGCG AGATGGAGCT GGCGGCGCGC
TTTCGCGTGA GCCAGGGCAC GGTGCGCAAG GCCATCGACG AGCTGGCGGC AGAGAACCTG
GTGATGCGCC GCCAGGGCAA GGGCACCTTC GTGGCCACCC ACGCGGCCCA GCATGTGCAG
TACCGCTTCC TCAAGCTGCA GCCGGACGGC GGCGACCAGC AGGGCGAGGG CCGTGCCGAG
CGCCGCATCA TCGACTGCCG GCGCCTGCGC GCATCGGCGG ACGTGGCGCG CGGCCTGGCG
CTGCGCAGCG GCGACGCCGT GATGCATGTG CGCCGCGTGC TGTCGTTCTC CGCAATCCCG
ACCATTTTGG AAGACATCTG GCTGCCGGGC CACGCCTTCA AGGGCCTGAC CGCCGAGCAG
ATGTCAGCCT ACCAGGGCCC CACCTACGCC ATGTTCGAGC TGGACTACGG CGTGCGCATG
GTGCGCGCCG ACGAAAAGAT CCGCGCCGTC CTGCCAGAGG CAGAACAGGC CCTGCTGCTG
GATGTCCCCA GCACCACGCC CCTGCTGAGC GTGGAGCGCA CCGCTTACAC ATACAACGAT
GTTCCCATGG AGTTACGCCG TGGCCTGTAC CGCACCGACA CCCATCACTA CCGCAACGCG
CTGAGCTGA
|
|---|
| Protein sequence | MPVLPPLASD NAAPTIGAGA STPAFSPLYQ QIKGLILQSL EAGEWRPGEL IPSEMELAAR
FRVSQGTVRK AIDELAAENL VMRRQGKGTF VATHAAQHVQ YRFLKLQPDG GDQQGEGRAE
RRIIDCRRLR ASADVARGLA LRSGDAVMHV RRVLSFSAIP TILEDIWLPG HAFKGLTAEQ
MSAYQGPTYA MFELDYGVRM VRADEKIRAV LPEAEQALLL DVPSTTPLLS VERTAYTYND
VPMELRRGLY RTDTHHYRNA LS
|
|---|
| |