| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2425 |
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| Symbol | |
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| ID | 5747988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2679951 |
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| End bp | 2681756 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641297507 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_001563448 |
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| Protein GI | 160897866 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACT CCAAAGCAAA CATCACCAAG CGCAAGTTTG ACGTCGTCAT CGTCGGCGCT
GGCGGCTCCG GCCTGCGTGC CGCGCTGGAA CTGTCGCGCG CCGGCCTGTC CGTGGCCTCG
CTGTCCAAGG TCTTCCCCAC GCGCTCGCAC ACCGTGGCTG CGCAGGGCGG CGTGTCCGCT
TCGCTGGGCA ACATGAGCGA GGACAACTGG CACTACCACT TCTACGACAC CATCAAGGGC
TCCGACTGGC TCGGCGACCA GGATGCGATC GAGTTCATGT GCCGCGAAGC GCCCAACGTC
GTGATCGAGC TGGAACACTT CGGCATGCCG TTCGACCGCA ACCCCGACGG CACCATCTAC
CAGCGTCCCT TCGGCGGCCA CACGGCCAAC TACGGTGAAA AGCCCGTGCA GCGCGCCTGC
GCCGCGGCCG ACCGTACCGG CCACGCCATG CTGCACACGC TGTACCAGCA GAACGTCAAG
TCCAAGACCA ACTTCTTCGT GGAGTGGATG GCGCTGGACC TGATCCGCAA CACCCAGGGC
GACGTGGTCG GCGTGACCGC CATCGAACTG GAAACCGGCG ACCTGTACGA GCTGCACGCC
AAGGCCGTGC TGCTGGCCAC GGGTGGCGCT GGCCGCATCT TCCAGGCATC GACCAATGCC
TTCATCAACA CCGGCGACGG CCTGGGCATG GCTGCACGCG CAGGCATCCC GCTGCAGGAC
ATGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GCTGACCGAA
GGCTGCCGTG GCGAAGGCGC CATCCTGCTC AACAGCGAAG GCGAACGCTT CATGGAGCGC
TACGCTCCCA CGCTGAAGGA TCTGGCACCG CGCGACTTCG TGTCCCGCTC CATGGACCAG
GAAATCAAGG AAGGCCGTGG CTGTGGTCCC AACAAGGACT ACATCCTGAT GAAGCTGGAC
CACCTGGGTG CAGACACCAT CCGCAAGCGC CTGCCTTCGG TGGAAGAGAT CGGCCACAAC
TTCGCCAACG TGGACATCAC CAAGGAACCG ATTCCCGTGG TGCCCACCAT CCACTACCAG
ATGGGCGGCA TTCCCACCAA CATCAACGGC CAGGTCGTGG TGTGGGACGG CCAGCAGAAC
AACGTGGTCA ATGGCCTCTA TGCCGTGGGC GAATGCTCCT GCGTGTCGGT GCACGGCGCC
AACCGCCTGG GCACGAACTC GCTGCTGGAC CTGCTGGTCT TCGGCAAGTC GGCCGGCAAG
CACATCGTGC AGTTCGTCAA CGGCTTCGGC GACCACAAGG CCGTGCCGGC CGATGGCTCC
GAGCGCACGC TCACGCGCCT GAACCAGCTC GACGACTCCA AGGAAGGCAC CTACGCCCAG
GACCTGGCTG GCGACATCCG CGCCACCATG CAGCAGCATG CCGGCGTGTT CCGCACGCAA
AAGAGCATGG ACGAAGGCGA AGTCAAGATC AACGCCATCC GCGAACGCGT GGGCTCCGTG
ACCCTCAAGG ACAAGTCCAA GGTCTGGAAC ACCGCCCGCA TGGAAGCGCT GGAAGTGGAC
AACCTGATCG AAGTGGCCCA GGCCACCATG ATCTCGGCCG CTGCCCGCCA CGAATGCCGC
GGCGCCCACA CCGTGTACGA CTACGAGCAT CCTGCCGACC ACGCCGAGTT CCCGCTGGGC
CGCAATGACA AGGAATGGCT CAAGCACACC CTGTGGTACA GCGCCACCAA CAGCCTGGAC
TACAAGCCCG TGAACCTGAA GCCCCTCACG GTGGACAGCG TGCCGCCCAA GGTCCGCACG
TTCTAA
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| Protein sequence | MSYSKANITK RKFDVVIVGA GGSGLRAALE LSRAGLSVAS LSKVFPTRSH TVAAQGGVSA
SLGNMSEDNW HYHFYDTIKG SDWLGDQDAI EFMCREAPNV VIELEHFGMP FDRNPDGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQQNVK SKTNFFVEWM ALDLIRNTQG
DVVGVTAIEL ETGDLYELHA KAVLLATGGA GRIFQASTNA FINTGDGLGM AARAGIPLQD
MEFWQFHPTG VAGAGVLLTE GCRGEGAILL NSEGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGCGP NKDYILMKLD HLGADTIRKR LPSVEEIGHN FANVDITKEP IPVVPTIHYQ
MGGIPTNING QVVVWDGQQN NVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGKSAGK
HIVQFVNGFG DHKAVPADGS ERTLTRLNQL DDSKEGTYAQ DLAGDIRATM QQHAGVFRTQ
KSMDEGEVKI NAIRERVGSV TLKDKSKVWN TARMEALEVD NLIEVAQATM ISAAARHECR
GAHTVYDYEH PADHAEFPLG RNDKEWLKHT LWYSATNSLD YKPVNLKPLT VDSVPPKVRT
F
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