Gene Daci_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2424 
Symbol 
ID5747987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2679219 
End bp2679923 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID641297506 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_001563447 
Protein GI160897865 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA CTTTCAAGAT CTACCGCTAC GACCCGGACA AGGATGCCAA GCCCTACATG 
CAGACCGTCG AGGTCGAGCT GGACGGCCAC GAGCGCATGC TGCTGGACGC CCTGGTCAAG
CTCAAGGAGA TGGACCCCTC CATCTCGTTC CGCCGCTCCT GCCGCGAAGG CGTGTGCGGC
TCGGACGCGA TGAACATCAA TGGCAAGAAC GGCCTGGCCT GCCTGACGAA CATGAAGACC
CTGCAGGGCG ACATCGTTCT CAAGCCCCTG CCCGGCCTGC CCGTGATCCG CGACCTGATC
GTGGACATGA CGCAGTTCTT CAAGCAGTAC CACTCGATCA AGCCGTACCT GCAGAACGAC
AGCTTCGCGT CTCCCACCAA GGAACGCCTG CAGTCGCCTG AAGAGCGCGA AGAGCTCAAC
GGCCTGTACG AGTGCATTCT GTGCGCCAGC TGCTCCACCA GCTGCCCCAG CTTCTGGTGG
AACCCCGACA AGTTCGTGGG CCCGGCCGGC CTGCTGCAGG CCTACCGCTT CATCGCGGAC
AGCCGCGACG AGGCCACGGG TGACCGCCTT GACAACCTGG AAGATCCGTA CCGCCTCTTC
CGTTGCCACA CCATCATGAA CTGCGTGGAC GTGTGCCCCA AGCACCTGAA CCCCACGCAG
GCCATTGGCA AGATCAAGGA ACTGATGGTC CGCCGGGCCA TCTGA
 
Protein sequence
MKRTFKIYRY DPDKDAKPYM QTVEVELDGH ERMLLDALVK LKEMDPSISF RRSCREGVCG 
SDAMNINGKN GLACLTNMKT LQGDIVLKPL PGLPVIRDLI VDMTQFFKQY HSIKPYLQND
SFASPTKERL QSPEEREELN GLYECILCAS CSTSCPSFWW NPDKFVGPAG LLQAYRFIAD
SRDEATGDRL DNLEDPYRLF RCHTIMNCVD VCPKHLNPTQ AIGKIKELMV RRAI