| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2420 |
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| Symbol | |
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| ID | 5747983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2675764 |
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| End bp | 2677029 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297502 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001563443 |
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| Protein GI | 160897861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.304256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGT CAGACTTTGC GCGAGGTTTT ATGCAGGACA CCGTGCCCCC ACCACCATCG
CAACAGCGGC CAGGCAAGCG CCGCCCGCTC GCCTGGATCA TTGCATTGCT CATCCTCATC
GCCATCGGAG CGGCGGTCTG GGTGCATCTG CAAGGCGCGC ATTCATCGGC GCGCCGCCCG
CAGGCACAGT CCGTGGGCGT GGCCACGGCC GCGCGCGGAG ACATGCCCGA AATGCTTTCC
GCGCTGGGGA CGGTGACCCC CGAGTCCACG GTCACGGTGC TGCCCCAGCT CAGCGGCTAT
CTCACCGAGG TCGGCTACCG CGAGGGGGAG ATGGTCAGCA AGGGCCAGTT CCTGGCACAG
ATTGACGCAC GCCAGTACGA GATCACGCGC CAGCAGGCCG AAGCCCAACT GGCCAAGGAT
CAGGCGGCTC TCGCGCAGGG ACAGGCCGAC CTGCAGCGCT ATGCCCAGCT CAACGAACGC
AAGTCCATCG CGCCGCAGAC CTATGCAGAC CAGCAGTTCC TAGTGCAGCA GCAGCAGGCC
GCCATCAAGG CCGACCAGGC CGCCATCGCC CAGGCCCGGC TCAACATCAG CCTGTGCCAC
ATCACCGCGC CCGTTGCAGG ACGGGTGGGA CTGCGGCTGG TCGATCCGGG CAACTATGTG
ACGGCCTCCA GCCAGCCCGG CATCGCCGTC ATCACCAGCA TCAAGCCCAC GACGGTGGAG
TTCAACGTGC CGCAGGCCTC GCTGGACCGC GTGCTGCAGC GCTTCCACTC GGGGGAACCG
CTGGCCGTGG TGGCCCTGAG CAGCGACAAC GGCCGGCAGG TGGCCAGCGG CACGCTGTAC
GCCATCGGCA ACCAGATGGC GACCGGCACG GGCACGGTGA CGCTTCGGGC CCGGTTCGCC
AACGATGACG AGGCGCTGTT TCCCAACGAG TTCGTAAACG TGCGCCTGCA TGTGGACACG
CTCAAGGACG TGGTGCTCGT GCCCACGGCC GCCATCCAGA CCGGCGCACC AGGCAGCTTC
GTCTTCCTGG TGAATGCCGA TCGCAACGCG GTCACGGTAC GAAAGGTGGC CACAGGCCCC
GCCGATGGCA GCCACACCGT GGTCACCCAG GGCCTGGTGG CTGGCGACAC CGTGGTGGTG
GATGGCGTGG ACCGGCTGAG CGACGGAGCG CGCGTGGCGC TGCAGGGCGC AGCACCTCAG
GCGGCCAAGG CAGCGGACAC GGTAGGCACG CCGGCACCGG CCCCTGCCCC TGCCCCTGCC
CGCTGA
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| Protein sequence | MLPSDFARGF MQDTVPPPPS QQRPGKRRPL AWIIALLILI AIGAAVWVHL QGAHSSARRP
QAQSVGVATA ARGDMPEMLS ALGTVTPEST VTVLPQLSGY LTEVGYREGE MVSKGQFLAQ
IDARQYEITR QQAEAQLAKD QAALAQGQAD LQRYAQLNER KSIAPQTYAD QQFLVQQQQA
AIKADQAAIA QARLNISLCH ITAPVAGRVG LRLVDPGNYV TASSQPGIAV ITSIKPTTVE
FNVPQASLDR VLQRFHSGEP LAVVALSSDN GRQVASGTLY AIGNQMATGT GTVTLRARFA
NDDEALFPNE FVNVRLHVDT LKDVVLVPTA AIQTGAPGSF VFLVNADRNA VTVRKVATGP
ADGSHTVVTQ GLVAGDTVVV DGVDRLSDGA RVALQGAAPQ AAKAADTVGT PAPAPAPAPA
R
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