Gene Daci_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2413 
Symbol 
ID5747976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2662863 
End bp2663735 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID641297495 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001563436 
Protein GI160897854 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC TGCCGCCCCT GGAACTCAAG AACGCCCATG CCTGCTTCGG CGGCGCACAG 
CGTTTCTACG AGCATTTCTC CGCCGAGATC GGCCTGAACA TGAAGTTTTC GGTCTTCCTG
CCGCCCAAGG CCGTGGCCGG CGAGAAGGTG CCCGCCGTGC TCTACCTGGC TGGGCTGACC
TGCACCGAAG AGACCTTCAT GACCAAGGCC GGCGCCCAGC GCCTGGCCGC CGAGCTGGGC
ATTGCGCTGA TCGCGCCCGA CACCAGCCCG CGCGGCGCAG GGCTGCCCGG CGAGGCCGAT
GCCTGGGACT TCGGCGTGGG CGCGGGCTTC TACCTGGATG CCACGGCCAA GCCCTGGGCG
CTGCACTGGC GCATGGAAAG CTATCTGCTG GGCGAGCTGC TGCCGCTGAT CGCCGCACGC
CTGCCCATTG ACGCGCAGCG GCTGGGCATC TTCGGCCACT CCATGGGCGG CCACGGCGCG
CTCACGCTGG CGCTGCGCCA TCCGGGCCGC TTCAAGAGCC TTTCGGCCTT CGCGCCCATC
GCCAACCCCG TCAACTGCCC CTGGGGCCAG AAAGCCTTCT CAGGCTATCT GGGCGATGAC
CGCAAGGCCT GGGAAGCCCA TGACGCCAGT TGCCTGATGG CCGCGCAGAC CCAGGCGCCC
TACCCGACCG GCATCCTCGT GGACCAGGGC CTGGCCGACA AGTTCCTGAT CGAAAAGCAG
CTGCTGCCCG AAGCCTTCGA GGCCGCCTGC GCCCAGGCCG GCCAGCCGCT GACGCTGCGC
CGCCACGGCG GCTACGACCA CGGCTACTAC TTCATCCAGA GCTTCATTGA TGACCATCTG
CGCCATCATG CAGAGCAGTT GAGTACCCCC TGA
 
Protein sequence
MSALPPLELK NAHACFGGAQ RFYEHFSAEI GLNMKFSVFL PPKAVAGEKV PAVLYLAGLT 
CTEETFMTKA GAQRLAAELG IALIAPDTSP RGAGLPGEAD AWDFGVGAGF YLDATAKPWA
LHWRMESYLL GELLPLIAAR LPIDAQRLGI FGHSMGGHGA LTLALRHPGR FKSLSAFAPI
ANPVNCPWGQ KAFSGYLGDD RKAWEAHDAS CLMAAQTQAP YPTGILVDQG LADKFLIEKQ
LLPEAFEAAC AQAGQPLTLR RHGGYDHGYY FIQSFIDDHL RHHAEQLSTP