Gene Daci_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2412 
Symbol 
ID5747975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2661890 
End bp2662735 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID641297494 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_001563435 
Protein GI160897853 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA CCACCGTCTC CACCGCCGCC GCCGATCTGT CGCCGCTGCA GGCCGTCATC 
TTCGACTGGG CCGGCACCCT GGTCGATTTC GGCTCGCTGG CGCCCACGCA GATCTTTGTC
GAGGCCTTTG CCAGCTTCGG CATCACCATC ACCCTGGCCC AGGCTCGCGG CCCCATGGGC
CTGTCCAAGT GGCAGCACAT CCACGAGCTG CTGCAGGACG AGGGCATCCG CGCGCAATGG
CACAAGGCCT TCGGCCAGCA GCCTGGCGAC GCCGACGTGG ATGCCATCTA CGCCCGCTTC
ATGCCCATGC AGATCGCCAA GGTCGGTGAG TTCTCGGCAC CCATCGAAGG CGCCCCCGAG
CTGCTGGGCT GGCTGCGCGC GCAGGGCCTG AAGGTGGGCT CGTGCTCGGG CTATCCGCGT
GAAGTCCTGA ACCAGCTGCT GCCCCAGGCA GCGGCCAACG GCCTGGCTCC CGACCATGTG
GTGGCCGGCG ATGAAATGGC CGCAGGCGGC CGCCCCGGCC CCTTCATGGC GCTGGCCAAT
GTGCTGGCGC TGGGCATCGG CGACGTGCGC GCCTGCGTGA AGGTGGACGA CACCGTGCCC
GGCATCGAGG AAGGCCGCAA CGCCGGCATG TGGACCGTGG GCCTGACCCT GTCCGGCAAC
GAAGTCGGCT ACTCCCCCGC CGAACTGGCC GCCGCCCCCG CCGAAGAAGT GCGCGAGCGC
GTGGCCCGCG CCGAGGCCAA GCTGCGCGCA GCCGGCGCCC ACCACGTGAT CGCCAGCGTG
AAGGACCTGC CGCAGGTACT GGAGCGTATT GCGCAGGACA TGCGTGCGGG GCGCATGCCT
GGGTGA
 
Protein sequence
MNHTTVSTAA ADLSPLQAVI FDWAGTLVDF GSLAPTQIFV EAFASFGITI TLAQARGPMG 
LSKWQHIHEL LQDEGIRAQW HKAFGQQPGD ADVDAIYARF MPMQIAKVGE FSAPIEGAPE
LLGWLRAQGL KVGSCSGYPR EVLNQLLPQA AANGLAPDHV VAGDEMAAGG RPGPFMALAN
VLALGIGDVR ACVKVDDTVP GIEEGRNAGM WTVGLTLSGN EVGYSPAELA AAPAEEVRER
VARAEAKLRA AGAHHVIASV KDLPQVLERI AQDMRAGRMP G