Gene Daci_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2406 
Symbol 
ID5747969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2656053 
End bp2657027 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID641297488 
Producthypothetical protein 
Protein accessionYP_001563429 
Protein GI160897847 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.692462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA GACAGTTCCT GACCTCGGCC GCCGCAGCCA CCGCCCTGCA TGCCCATCCG 
GGCTTTGCAC AGGCCAGGCC GCCAGCGGGC CCGGTCAAAA TCCTCGTCGG CTTCTCGGCA
GGCGGCGGCA CGGACATCCT GGCGCGGATC ATCGCCAACC GGCTCAACCA GCTGTGGGCC
ATTCCCGTCA TCGTCGAGAA CCGGCCAGGG GCGGCGGGGC TGATCGCCGC TGCCGAGGCC
GCCAGGGCCG CGCCCGATGG GCAGACGCTC ATGATGGGCC ACATCAATGC CCTGGGCATT
GCCCCTGCGC TCAATCCCAG GCTCGGCTTC TCGCCGGAGC GGGACTTCTC CGCCATCGCC
CTGGTGGGCC AGACCCCGCA GGTCCTGGTT GCCAGCCCCA AGGCTTCCGC CACCATGCAG
GGCCTGCTGG CCGCATTGAA GCAAAAGCCG GGGGAGGTCA GCTTCGGCTC CTCGGGCACG
GGGTCGGCCC AGCATCTTGC GCTGGCGCTG TTCGAGCAGA CTGCGGCGGT GTCCGCGCTT
CATATCCCGT ACAAGGGCGC GTCGAACGTG ATGACGGATC TGCTGGGCGG CCAGATCGAC
TACGCGTTCG AGGGGATGAC CACGGCGGCG CCCTTCATCA AGGGCGGAAA AGTCCATGCA
GTGGCTCAGA CGGGCGTGAA GCGCGCCAAG GCCTTCGCGG AGATTCCCAC GGTGGCGGAG
CAGGGCTATA CCGGGTTCAA CGCGAGCATC TGGTTCGGCC TGGTGGGCCC CGCAAGAATG
CCTGCCGATC TCGTGGCCCG CATCAATGCG GACGTCAACC GCATCCTGGC CATGCCCGAT
GTGGTGGCCA AGCTCGAAGA GTTCGGCGCA GAGGATGGAG GGGGGACGCC GCAGCGCTTT
GACGCCTTCA TGCGCGATGA ACGGGCGAAG TGGGCCCGGC TGATTCAGGC GCGCGGAATC
AGGGTGGAGG GCTGA
 
Protein sequence
MQRRQFLTSA AAATALHAHP GFAQARPPAG PVKILVGFSA GGGTDILARI IANRLNQLWA 
IPVIVENRPG AAGLIAAAEA ARAAPDGQTL MMGHINALGI APALNPRLGF SPERDFSAIA
LVGQTPQVLV ASPKASATMQ GLLAALKQKP GEVSFGSSGT GSAQHLALAL FEQTAAVSAL
HIPYKGASNV MTDLLGGQID YAFEGMTTAA PFIKGGKVHA VAQTGVKRAK AFAEIPTVAE
QGYTGFNASI WFGLVGPARM PADLVARINA DVNRILAMPD VVAKLEEFGA EDGGGTPQRF
DAFMRDERAK WARLIQARGI RVEG