Gene Daci_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2398 
Symbol 
ID5747961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2648526 
End bp2649677 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID641297480 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001563421 
Protein GI160897839 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.488015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTTC ACGAACTGAT CAGCTACGAC ATCCTGCGCC TGCTGTGGTG GGGCCTGCTG 
GGCGTGCTGC TCATCGCCTT TGCCGTCACC GATGGCTTTG ACCTGGGCGC TGCCGCGCTG
CTGCCGCTGG CGGCCAGGAC CGACGTGGAG CGCCGCGTCG TCATCAACTC TCTGGGTCCG
GTCTGGGAAG GCAACCAGGT CTGGCTCATC CTGGGCGGCG GTGCCATCTT TGCGGCCTGG
CCGCAGCTGT ATGCCGTGTC GTTCTCGGGC TTTTACCTGG CCATGTTCGC GGCCCTGGTG
GCGCTGATCC TGCGGCCCGT GGCCTTCAAG TTCCGCAGCA AGCGCGAGGA GCCGGCCTGG
CGCGCGCGCT GGGATGCCGT GCTGTGCATG GCCGGCGTGG TGCCTGCGCT GATCTTCGGC
GTGGCCCTTG GCAATGTGCT GCAGGGCGTG CCCTTCCGCC TGGCGCCCGA CATGCGCATC
TACTACGAGG GCACGTTCTT CGGCCTGCTC AACCCGTTTG CGCTGTTGGC CGGCCTGGTC
TCGTTGTGCA TGCTGCTTAT GCATGGTGCG TCCTGGCTGG TGTTCAAGAC CGAGGGCGAT
GTGGCCGCGC GCGCGCGCCG CTTCGGCATG GTGGCGGCCG TCGCCACCAC GGTGCTGTTC
GCGGCGGCTG GCGTGTGGCT GGCCGCGCTC AATGGCTACC GCATCACCAG CGAGATCAAC
ACCACCGGAC CGTCCAACCC GCTGTTCAAG ACGGCTGCGC TGCAGGCGGG CGCCTGGTTC
GCCAACTACC AGGCCCGGCC CGTGCTCTGG GCCGTGCCGG CCATCGGGCT GCTGATGCCG
CTGCTGGCGG CGCTGGGCCT GTGGCTGCGC CGCGAGTGGC TGGCCCTGCT GTCCAGCGGC
CTGGGCATTG CCGGCATCAT CGCCAGCGTG GGGGCGTCCA TGTTCCCGTT CATCCTGCCC
TCGTCGCTGA ACCCGCAGCA CAGCCTCACG GTCTGGGACT CTTCGTCCAG CCATGTGACG
CTGTTCATCA TGCTGGTGTG CGCGCTTATC TTCGTGCCCC TCATCGTGGC CTACACCAGC
TGGGTCTACA GCGTGCTGCG CGGCAAGGTC GACCCGATGG CCATCATCGA GGGCCGTGGC
CACTCGTACT GA
 
Protein sequence
MILHELISYD ILRLLWWGLL GVLLIAFAVT DGFDLGAAAL LPLAARTDVE RRVVINSLGP 
VWEGNQVWLI LGGGAIFAAW PQLYAVSFSG FYLAMFAALV ALILRPVAFK FRSKREEPAW
RARWDAVLCM AGVVPALIFG VALGNVLQGV PFRLAPDMRI YYEGTFFGLL NPFALLAGLV
SLCMLLMHGA SWLVFKTEGD VAARARRFGM VAAVATTVLF AAAGVWLAAL NGYRITSEIN
TTGPSNPLFK TAALQAGAWF ANYQARPVLW AVPAIGLLMP LLAALGLWLR REWLALLSSG
LGIAGIIASV GASMFPFILP SSLNPQHSLT VWDSSSSHVT LFIMLVCALI FVPLIVAYTS
WVYSVLRGKV DPMAIIEGRG HSY