| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2396 |
|---|
| Symbol | |
|---|
| ID | 5747959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2645193 |
|---|
| End bp | 2646878 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641297478 |
|---|
| Product | cysteine ABC transporter permease/ATP-binding protein |
|---|
| Protein accession | YP_001563419 |
|---|
| Protein GI | 160897837 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.494117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCC GCTCCACCCT CTGGCCCGTG CTTGCCGCCC TGGCGCGCAT GGCGCCCCGG
CGCCTGTGGC TGGGCGGCGC GCTGCTGGCC CTGCTCACGG TGCTCATGGG CATGGCGCTG
CTGGGTCTGT CGGGCTGGTT CATCACGGCC ACGGCACTGG CCGGGCTGCT GCCGGCCACG
GCCATCGTTT TCGACGTCTT CATGCCCTCG GCCGGCATAC GCCTGCTGGC CCTGGGCCGC
ACGGGCACGC GCTATGCCGA ACGGCTGGTC ACCCATGACG CCACCCTGGC CGTGCTGGCC
GCCCTGCGCG AGCGGCTGCT GCGCAGCTGG GCCACGCCCG CCGCCGCCCT GAGCCTGCGC
CTGCGGCCCG CACGCCTGCT GCAGCGGCTG ACGGCCGACG TGGATGCGCT GGACAGCCTG
TACCTGCGCC TGTTCGTGCC CTTGCTGGCC GCCACGGGTG CCACGCTGAT GGCCGCCCTG
GCACTGGGCC TGATGCGCTG GTGGCTGGGC CTGGCCTTGG CTGCGTGGCT GCTGGCCACG
GGCCTGGGCA GCGCCCTGTG GCTGGCGCGC AGTGCGCGCC GGCCCGCCGT GCGCCGTGCG
CTGGCGCTGG AGTCCCTGCG CGCCCGCACG GCCGACCTGG TGGCCGGGCA GGCGGAGCTG
GCCATGGCCG GCACCCTGGC CGCGCATTGC GAACGCATTG CCGCCCTGGA CGCACGCGTG
GCCGAGGCCG ACGCCGAGCT CCACGGCCTG GAGGCCCGAA CCTCCTTCGT GCAGGGCCTG
TGTGGCGCCC TGGCCCTGGC CGGTGTGCTG CTGGGCGTAG GCTGGCTGGC CGAGGCCGGC
CTGCTGGGCG CCCCCGTGGC CGCGCTGGCC CTGCTGCTGG CGCTGACGGC CATGGAGCCC
TTTGCCGCAT TGCGCCGTGG CGCGCTGGAG GCCGGCCGCA GCTGGCTGGC CGCGCGCCGG
CTGGCGCCTG CCCTGCGCGA TGGCGCTGCG CAAGTCGCCT GCGAACCGGC TGCGCCCAGG
CAAGGCTTGG CGGTTGAGCT GGAGCAGGTC GTGGCACCCC GTGCCGCCGT GCTGGCCCAG
GACATCCGTA TCGCCGAAGG CGAGCGTGTC GCCCTGCTGG GCGCCAGCGG CGCGGGCAAG
ACCACGCTGC TGTCCCTGAT GGCCGGCGAG CTCCCGCCGC TGGCCGGCGC CGTGCGTGCC
CGGCGCTGCA CCTGGATGAC GCAGCGCACC GAACTGTTCG AGGACAGCCT GCGCGACAAC
CTTTTGCTGG CTTGCCCCGA GGCCGCCGGG GACACGCTGT GGGCGGCGCT CGAAGTCGCC
GGGCTGGCCG GCGATGTGCG CGCCATGGCG CAGGGTCTGG ACACGCGGCT GGGCGAGGGC
GGGCTGGGCC TGTCCGGCGG CCAGGCACGG CGCCTGGCGC TGGCACGGCT GCTGCTGAGC
CCCGCGCGCT GCTGGCTGCT GGACGAAGTG ACCGAAGGCC TGGATGCACG CACGGCCGCC
GACCTGCTGG TGCGGCTGGA CAGTGCAGCC CGGGGCCGCA CCCTGGTGCT GGCCACCCAC
AAGCTGCGGG AGGCGCAACT GGCCGACCGG CTGCTGTGGG TGGAGCAGGG CCGCGTGGTG
TCCGAGGCGC TGCGCGGCAC ACCGCCGTTC GAGGCGGCCC TGGCGCGCCT GCGGCAGGAC
GGCTGA
|
|---|
| Protein sequence | MKPRSTLWPV LAALARMAPR RLWLGGALLA LLTVLMGMAL LGLSGWFITA TALAGLLPAT
AIVFDVFMPS AGIRLLALGR TGTRYAERLV THDATLAVLA ALRERLLRSW ATPAAALSLR
LRPARLLQRL TADVDALDSL YLRLFVPLLA ATGATLMAAL ALGLMRWWLG LALAAWLLAT
GLGSALWLAR SARRPAVRRA LALESLRART ADLVAGQAEL AMAGTLAAHC ERIAALDARV
AEADAELHGL EARTSFVQGL CGALALAGVL LGVGWLAEAG LLGAPVAALA LLLALTAMEP
FAALRRGALE AGRSWLAARR LAPALRDGAA QVACEPAAPR QGLAVELEQV VAPRAAVLAQ
DIRIAEGERV ALLGASGAGK TTLLSLMAGE LPPLAGAVRA RRCTWMTQRT ELFEDSLRDN
LLLACPEAAG DTLWAALEVA GLAGDVRAMA QGLDTRLGEG GLGLSGGQAR RLALARLLLS
PARCWLLDEV TEGLDARTAA DLLVRLDSAA RGRTLVLATH KLREAQLADR LLWVEQGRVV
SEALRGTPPF EAALARLRQD G
|
|---|
| |