| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2395 |
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| Symbol | |
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| ID | 5747958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2643499 |
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| End bp | 2645196 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641297477 |
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| Product | cysteine ABC transporter permease/ATP-binding protein |
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| Protein accession | YP_001563418 |
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| Protein GI | 160897836 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC CTTGTACCCC GTCATTGCCT GAGTTCCACC AGCTGGCGCG TCGTCCGATG
GCGGGTACGG GGCGCCTGGT GCTGGCCTCG CTGCTGTGGC TGCCCCAGGC GGCGCTGCTG
GCGCTGGCCG TGCAGTCCAT GGCCGATGGC GCAGGCGTGG AGCCGCTGTG GCCACTGTGG
CAGCTTGCGG CCGGCGTTGC GCTGCTGGGC GGGTTGCGCG CCTGGTGCGA TGCCAGCGGC
ACGCGCCGCG CCAATCTGCA GGCGCGCAGC CTGGTGAGTG CGCTGCGAAT GCAGGTGCTG
CGCACGCTGG CGGGCACCTC GCCGCTGGAC CGCCAGCGCG CGGCCTCGGG CCAGGCGGCC
AGCGCCATGG CCGAGCAGGC CGAGGCCATC GTGCCCTGGC TGTCGCGCTA CCAGACCGCC
ATGTGGCGCG TGCGCACCGT GCCGCTGGTG ATTGCGCTGG CCGTGGCCAG CCAGAGCTGG
GTGGTGGCGC TGATCCTGGT GGTGGCCGCG CCGCTGATCC CGCTGTTCAT GGCCATCGTC
GGCTGGCGCG CCAAGGCGGC CAGCCAGGCG CAGATGGTGG AGCTGGGCGG CATGAACGCC
TTCCTGCTCG ACCGCTTGCG CGGCCTGTCC ACCCTGCGCG CCCTGGGCGC GGTGGATGCC
ACGGCGCAGC GGCTGCGCGC CAATGCCGAA TCCCTGCGCG AACGCAGCAT GCGCGTGCTG
CGCATCGCCT TTCTGTCCTC TGCGGTGCTG GAGCTGTTCT CGGCCCTGGG CGTGGCCATG
GTGGCCGTCT ACGTGGGCTT TCACCTGCTG GGCCATCTGC CCTTTGGCAG CTGGGGCCAG
ACACTGAGCC TGGGCCAGGC GCTGTTCGTG CTGCTGCTGG CGCCCAGCTT CTTCGATCCC
CTGCGTGAGC TGTCTGCCGT CTGGCATGAC CGCGCCAGCG GCGAGGCCGC ACTGCAGGCC
CTGGGCGAGC TGGGCCGCGA TGCGCAGCCG CTGCCCGGCG CACTGGCTGC GCCCGGCAGG
GCGGCCGGCC AGGCCTGCGC CCTGCACCTG GAGCAGGTGC GGCCCCAGGC GCCAGGCGGC
GCGGTCACGC TGCCGGCGCT CACGGTGGAC GTGCGGCCTG GCGAGCATGT GGCGCTGTGG
AGCCCCAGCG GCAGCGGCAA GTCGCTGCTG CTGGCGCAGA TTGCAGGCCT GCTGCCGGTG
GCCGAGCCTG GGCGCATCCA TATCGACGGC CAGCTGCTCG ACGGCGAATC GGCCGGCCGG
CTGCGCGCGC GCATGGCCTG GATGGGACAG AGCCCCCATG TGTTCGCCGG CTCGGTGGCC
GAAAACCTCC GGCTGGGCCG CCCGGGATTC ACCTTCGGCG AACTGCGCCA GGCCCTGCGG
CTGGCCGGGC TGGGCAAGCT GGCCGAGACC CGGCCCGGCG CCACGCTGGG CGAGGGCGGA
GCCGGCCTGT CGGGCGGCGA AATCGTGCGC CTGGCCCTGG CGCGCCTGGC CTTGTCGCGC
GATGCAGGCC TGCTGCTGGT CGATGAACCC ACGGCCCACC TGGACCCGGC CACGGCCGCC
CAGGTCACCG ATGCCCTGCT GCAGCTGGCG CGCGGTCGCA CGCTGATCGT CGCCACCCAC
GATGCCGAAC TGGCCGCCGC CATGCACCGC GTGGTGGATC TGGCGGGCCA TGCCGCCCCA
CAGGAGCTGG CCGCATGA
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| Protein sequence | MNKPCTPSLP EFHQLARRPM AGTGRLVLAS LLWLPQAALL ALAVQSMADG AGVEPLWPLW
QLAAGVALLG GLRAWCDASG TRRANLQARS LVSALRMQVL RTLAGTSPLD RQRAASGQAA
SAMAEQAEAI VPWLSRYQTA MWRVRTVPLV IALAVASQSW VVALILVVAA PLIPLFMAIV
GWRAKAASQA QMVELGGMNA FLLDRLRGLS TLRALGAVDA TAQRLRANAE SLRERSMRVL
RIAFLSSAVL ELFSALGVAM VAVYVGFHLL GHLPFGSWGQ TLSLGQALFV LLLAPSFFDP
LRELSAVWHD RASGEAALQA LGELGRDAQP LPGALAAPGR AAGQACALHL EQVRPQAPGG
AVTLPALTVD VRPGEHVALW SPSGSGKSLL LAQIAGLLPV AEPGRIHIDG QLLDGESAGR
LRARMAWMGQ SPHVFAGSVA ENLRLGRPGF TFGELRQALR LAGLGKLAET RPGATLGEGG
AGLSGGEIVR LALARLALSR DAGLLLVDEP TAHLDPATAA QVTDALLQLA RGRTLIVATH
DAELAAAMHR VVDLAGHAAP QELAA
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