| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2394 |
|---|
| Symbol | |
|---|
| ID | 5747957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2642304 |
|---|
| End bp | 2643263 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641297476 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001563417 |
|---|
| Protein GI | 160897835 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGC TTCCCCCGGC GCTGAAGAAA CTGGCCCTGC CAGTGATCGG CTCGCCGCTG
TTCATCATCA GCAACCCCAA GCTCGTGATC GCCCAGTGCC AGGCCGGCAT CGTGGGTTCC
ATGCCCGCGC TCAACGCGCG CCCGGCCGAG CAGCTCGAAG ACTGGCTGGC CGAGATCACC
GAGACCCTGG CCGCCTGGGA CAAGGCCCAT CCGGACCGGC CCTCGGCGCC GTTCGCCATC
AACCAGATCG TGCACAAGAG CAATGACCGG CTCGAGCACG ACATGCAGAT GTGCGCCAAG
TACAAGGTGC CCATCGTCAT CACCAGCCTG GGTGCGCGCG AGGACGTGAA CCAGGCCGTG
CACAGCTGGG GCGGCGTGGT GCTGCACGAC ATCATCAACA ACAAGTTCGC GCACAAGGCC
ATCGAAAAGG GGGCCGACGG CCTGATCGCC GTGGCGGCGG GCGCGGGCGG CCATGCGGGC
GTCAAGAGCC CGTTCGCGCT GATCCAGGAA ATCCGCGAAT GGTTCGACGG CCCCGTGGCG
CTGTCGGGCT CCATCGCCTC GGGCGGTGCC ATCCTCGCGG CCCAGGCCAT GGGTGCGGAC
TTCGCCTATA TCGGCTCGGC CTTCATTGCC ACGCATGAGG CGCGTGCGCA CGATGCCTAC
AAGCAGGCCA TCGTGGACGG CACCTCCGAC GACATCGTCT ACAGCAACCT GTTCACGGGC
GTGCACGGCA ACTACCTGGC GCCGTCGATC CGCGCGGCTG GCCTGGACCC CGACAACCTG
CCCGAGTCGG ACCCCAGCAA GATGAACTTC GGCGGCGACG CCAAGAAGGC CTGGAAGGAC
ATCTGGGGCT GCGGCCAGGG CATTGGCGCC ATCCGCGAAG TCACGGGTGC GGGCGAGCTG
GTCGAGCGTC TCAAGCGCGA ATACAACCAG GCGCGCGACC GCCTGCTGTC CACCCCGTAA
|
|---|
| Protein sequence | MSKLPPALKK LALPVIGSPL FIISNPKLVI AQCQAGIVGS MPALNARPAE QLEDWLAEIT
ETLAAWDKAH PDRPSAPFAI NQIVHKSNDR LEHDMQMCAK YKVPIVITSL GAREDVNQAV
HSWGGVVLHD IINNKFAHKA IEKGADGLIA VAAGAGGHAG VKSPFALIQE IREWFDGPVA
LSGSIASGGA ILAAQAMGAD FAYIGSAFIA THEARAHDAY KQAIVDGTSD DIVYSNLFTG
VHGNYLAPSI RAAGLDPDNL PESDPSKMNF GGDAKKAWKD IWGCGQGIGA IREVTGAGEL
VERLKREYNQ ARDRLLSTP
|
|---|
| |