| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2383 |
|---|
| Symbol | |
|---|
| ID | 5747946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2628642 |
|---|
| End bp | 2629820 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641297465 |
|---|
| Product | lytic murein transglycosylase B |
|---|
| Protein accession | YP_001563406 |
|---|
| Protein GI | 160897824 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.455496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC AACGACTGAT CCCCTCCGCC CTGCTGCTGC TTGCGGCCGC CGCCCTGCCC
TGCGGCGCGC TGGCCAGCAA GCCGGCGCCC GCCCAGACCG GCGCAGCCAA GACTGCCGCC
AAGTCCACGG CCAAACCTTC CACGAAAAAG CGCACGACCG CTGCTGCCGC CGCCACGGCG
GCAGGCGGCG CCGCCGTGGC CAGGACCGTG CAGGGCAGCA CGCCCTACGG CGAACGGCCT
GATGCCATGC AGATGGCCGC CGACATTGCG ATGCGCCACG ACCTGCCGGT GGACTGGGTG
CGCGACACCA TCGCCCAGGC GCGCTTTCTG CCCCAGGTTC CCCGCCTGAT GACGCCGGCT
GCCCAGGGCA CGGCCAAGAA CTGGGGCGTC TACCGCAGCC GCTTTGTCGA GCCCGTGCGC
ATACGCGCCG GAACCCGTTT CTGGCAGGAC AATGCCGCCG CGCTGGCGCG TGCCGAAAAG
CAGTACGGCG TGCCGGCCGA AATCATCGTC GGCATCATCG GCGTGGAGAC CATCTACGGC
CAGCAGATGG GCAACTTCCG CGTGATCGAC GCCCTGGCCA CGCTGAGCTT CGACTTCCCC
GCAGCCCACC CCCGCGCGCA GGCACGCACC GAGTACTTCC GCGGTGAGCT GGAGCAGTTC
CTGCGCTTCA CGTACCGTGC GGGCACGGAC CCGTTCTCGC TGCGCGGCAG CTACGCGGGC
GCCATGGGCA TGGGCCAGTT CATGCCCAGC AGCTGGGTGA AGTGGGCGGT GGACTTCGAC
GGCGACGACC GCATCGACCT GTTCGGCAGC GCGGCCGACG CCATCGGCTC GGTGGCCAAC
TACTTTGTCG CGCATGGCTG GAAAAGCGGC ATGCCCACCC ACTACCCTGT GATCATGCAG
GCCCAGGGCG CCGACCTGGC CGCCCTGCTG GCGCCCGACA TCCTGCCCCA GTTCACGGCC
GACGAGATGG CTGCGCGCGG CGTGCAGCTG CCGGGCAGCG GCGCGGCGCA TCAAGGGCCG
CTGGCCCTGG TCAAGCTGGA AAACGGCGCG CAGGGCCAGC CGCTGTACAT CGCGGGCACG
GAGAACTTCT ATGCCATCAC GCGCTACAAC TGGTCCAGCT ACTACGCGCT GTCCGTGATC
GAACTGGGCC AGGAAGTCGC TACGGCCATG GGCCGCTGA
|
|---|
| Protein sequence | MTKQRLIPSA LLLLAAAALP CGALASKPAP AQTGAAKTAA KSTAKPSTKK RTTAAAAATA
AGGAAVARTV QGSTPYGERP DAMQMAADIA MRHDLPVDWV RDTIAQARFL PQVPRLMTPA
AQGTAKNWGV YRSRFVEPVR IRAGTRFWQD NAAALARAEK QYGVPAEIIV GIIGVETIYG
QQMGNFRVID ALATLSFDFP AAHPRAQART EYFRGELEQF LRFTYRAGTD PFSLRGSYAG
AMGMGQFMPS SWVKWAVDFD GDDRIDLFGS AADAIGSVAN YFVAHGWKSG MPTHYPVIMQ
AQGADLAALL APDILPQFTA DEMAARGVQL PGSGAAHQGP LALVKLENGA QGQPLYIAGT
ENFYAITRYN WSSYYALSVI ELGQEVATAM GR
|
|---|
| |