Gene Daci_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2377 
Symbol 
ID5747940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2620604 
End bp2621884 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID641297459 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_001563400 
Protein GI160897818 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAA GCCCCAAGCC CACCACAGGC CCTCTCACCG CCGGCCCGGC CCTGCCCCGG 
CGCGACTTTC TGCGCCAGGC CGGCACGCTG GCAGGCGGTG CGGCGCTCTA CACCCAGCTG
GGCCACCATG GCGCCTGGGC GGCCGGCTCG GATGCGCCAG AGAAGAAAGA GGTGCGCATC
GGCTTCATCC CGCTGACCGA CTGCGCCAGC GTGGTCATGG CCTCGGTGCT GGGGATCGAT
CAGAAGTACG GCGTCAAGAT CATTCCTTCC AAGGAAGCGA GCTGGGCCAG CGTGCGCGAC
AAGCTGGTCA ACGGCGAGCT GGACTTTGCC CACGTGCTCT ACGGCCTGGT CTACGGCGTG
CACCTGGGCG TGGGCGGCGC CAAGAAGGAC ATGGCCGTGC TGATGACGCT CAACCACAAC
GGCCAAGCCA TATCGCTGTC GAAGAAGCTG GCCGACAAGG GTGCCGTCAA TGGTGCGGGC
CTGGCCAAGC TGATGGCCAG CGAAAAGCGC GAATACACCT TTGCCCAGAC CTTTCCCACG
GGCACGCATG CCATGTGGCT GTACTACTGG CTGGCGGCCA ACGGCATCCA CCCGCTCAAG
GATGCCAAGG TCATCACCGT GCCGCCGCCG CAGATGGTGG CCAATATGCG CGTGGGCAAC
ATGGACGGCT TTTGCGTGGG CGAGCCCTGG AACCACCGCG CCATCATGGA CGGCATCGGC
GTCACGGCCG CCACCACCCA GTCCATCTGG CAGGACCACC CCGAAAAGGT GCTGGGCACC
ACGGCCGAGT TCGCACGCCA GAACCCCAAC ACGGCACGCG CCGTGACGGC GGCCATCATC
GAGGCCAGCC GCTGGATCGA CGAGAGCCTG GCCAACAAGA CCCGCATGGC CGAGACCATC
GCCGGCAAGG CCTATGTGAA CACCGGCGTG GACGCCATCA ACCAGCGCAT CCTGGGCCGC
TACCAGGACG GCATGGGCAA GACCTGGGAC GACCCCAACC ACATGAAGTT CTACGGCGAC
GGCAGCGTGG GCTACCCCTA CCTGTCCGAC GGCATGTGGT TCCTGACCCA GCACAAGCGC
TGGGGCCTGC TCAAGGACCA CCCCGACTAC CTGGGCGTGG CCCGCTCCAT CAACCGCCTG
GACATCTACC AGCAGGCCGC CACCGCCGCC AAGGCCCCGC TGCCCAAGGC GGAGATGCGC
AGCAGCAAGC TCATGGATGG CACGGTCTGG GACGGCAAGG ATCCGCGCAA GTACGCAGAC
AGCTTTGCCA TCAAGGCCTG A
 
Protein sequence
MASSPKPTTG PLTAGPALPR RDFLRQAGTL AGGAALYTQL GHHGAWAAGS DAPEKKEVRI 
GFIPLTDCAS VVMASVLGID QKYGVKIIPS KEASWASVRD KLVNGELDFA HVLYGLVYGV
HLGVGGAKKD MAVLMTLNHN GQAISLSKKL ADKGAVNGAG LAKLMASEKR EYTFAQTFPT
GTHAMWLYYW LAANGIHPLK DAKVITVPPP QMVANMRVGN MDGFCVGEPW NHRAIMDGIG
VTAATTQSIW QDHPEKVLGT TAEFARQNPN TARAVTAAII EASRWIDESL ANKTRMAETI
AGKAYVNTGV DAINQRILGR YQDGMGKTWD DPNHMKFYGD GSVGYPYLSD GMWFLTQHKR
WGLLKDHPDY LGVARSINRL DIYQQAATAA KAPLPKAEMR SSKLMDGTVW DGKDPRKYAD
SFAIKA