| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2371 |
|---|
| Symbol | |
|---|
| ID | 5747934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2613976 |
|---|
| End bp | 2615256 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297453 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001563394 |
|---|
| Protein GI | 160897812 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CCAGGCTGGT GATGGTGGGC AACGGCATGG CCGGCGTGCG CACGCTGGAG
GAGCTGCTCA AGATCGCGCC CGACCTCTAC GAGATCACGG TATTCGGGGC CGAGCCCCAC
CCCAACTACA ACCGCATCAT GCTGTCGCCC GTGCTGGCGG GCGAGCAGCA GCTGGACGAG
ATCATCCTCA ACGACTGGTC CTGGTATGCG CAGCACGGCA TCACCCTGCA TGCGGGCTGC
CGCGTGCACG CAGTCGACCG CGCGCGCCGC GTGGTGCACG CCGTGGACGC GGCCGGACAG
CCGGTGAGCG CCGAGTACGA CCGGCTGATC CTGGCCACGG GCTCGCGCCC CTTCATGCTG
CCCGTGCCCG GGCGCGAGCT GGAAGGCGTG CTGGGCTACC GCGACATTGC CGACACCCAG
GCCATGATCG CGGCGGCCGC CACCCACCGC CATGCCGTGG TCATCGGCGG CGGCCTGCTG
GGCCTGGAGG CCGCCAACGG ACTCATGAAG CGCGGCATGG ACGTTACCGT GGTGCATGCG
GGCGAGCGCC TGCTGGACCG CCAGCTGGAC GAGACCGCAG CCGCCATGCT GCAGGCCTCG
CTGGCCGAGC GCGGCATGCG CTTTCTGATG CAGGCCCAGA CCCGGGCGCT GACGGGCGAC
GGCCAGGGCC GCGTGGCCTG CGTGCACCTG CAGGACGGGC GCGAGGCACC GGCCTCGCTG
GTGGTCATGG CCGTGGGCAT CCGGCCCGAG ACCACGCTGG CCGAGCAGAT GCACCTTCAC
GTGCAGCGCG GCATCGTGGT CAGCGACACG CTGCAGACCG TGACCGACCC GCGCATCTAC
GCCGTGGGCG AGTGCGCGGC GCACCGGGGC GTGGCCTACG GGCTGGTGGC GCCGCTGTTC
GAGCAGGGCA AGGTGCTGGC CAACCACCTG GCGGAGATGG GCATCGGCCG CTATCCGGGC
TCGCAGACCT CGGCCAAGCT CAAGGTCACG GGCATCCATC TGTTCAGCGC GGGCGACTTC
CGCGGCGACG AGGGCACGGA GGAAATCGTG CTCAGCGACC CCGGCGCGGG CGTATACCGC
AAGCTTGTGC TGCGCGGTGA CAGGCTGGTC GGCGCCTGCC TGTATGGCGA CACCGAGGAC
AGCGGCTGGT ACTTCCGCCT GCTCCGCGAT GGCGTGGCAG TGCAGGAACT GCGCGACCGC
CTCATGTTCG GCGAAAGTCA AGCCAGCCTA GCCAGCCTAG CCAGCAAGGC CAGCCCGGCC
GACCCGGCCA GCGGCCCGTG A
|
|---|
| Protein sequence | MKKSRLVMVG NGMAGVRTLE ELLKIAPDLY EITVFGAEPH PNYNRIMLSP VLAGEQQLDE
IILNDWSWYA QHGITLHAGC RVHAVDRARR VVHAVDAAGQ PVSAEYDRLI LATGSRPFML
PVPGRELEGV LGYRDIADTQ AMIAAAATHR HAVVIGGGLL GLEAANGLMK RGMDVTVVHA
GERLLDRQLD ETAAAMLQAS LAERGMRFLM QAQTRALTGD GQGRVACVHL QDGREAPASL
VVMAVGIRPE TTLAEQMHLH VQRGIVVSDT LQTVTDPRIY AVGECAAHRG VAYGLVAPLF
EQGKVLANHL AEMGIGRYPG SQTSAKLKVT GIHLFSAGDF RGDEGTEEIV LSDPGAGVYR
KLVLRGDRLV GACLYGDTED SGWYFRLLRD GVAVQELRDR LMFGESQASL ASLASKASPA
DPASGP
|
|---|
| |