Gene Daci_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2370 
Symbol 
ID5747933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2611061 
End bp2613925 
Gene Length2865 bp 
Protein Length954 aa 
Translation table11 
GC content72% 
IMG OID641297452 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001563393 
Protein GI160897811 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA CCCGATCCAC CTGCCCCTAT TGCGGCGTAG GCTGCGGCGT CCTCATCGAA 
AGCGATGGTG CGCGCATCAC GGGCGTGCGC GGCGATCCGG CGCACCCCGC CAACCACGGC
CGCCTGTGCA CCAAGGGCAG CACCCTGCAC CTGACGGCCT CGCCCGCCCT GGCACAGCAG
ACGCGGCGGC TGCAGCCCGC GCTGCGTGCC ACGCGCGGCG CGGCGCCCCA GGATGTGGGC
TGGGATGCCG CACTGGACCT GGCCGCCGGC AGGCTGGCCT CCATCGTGCA GGAGCACGGC
CCCGACGCCG TGGGCCTGTA TGTGAGCGGC CAGTTGCTGA CCGAGGACTA CTACGTCTTC
AACAAGCTGG CCAAGGGCCT GATCGGCACC AACAACATCG ACACCAATTC GCGCCTGTGC
ATGAGCAGCG CCGTGGCCGG CTACAAGCTC ACGCTGGGCG CCGACGCGCC ACCGGCCTGC
TACGAGGATG TGGACCATGC GGACTGCCTT TTCATCGCGG GCAGCAACGC GGCCTGGGCG
CATCCCGTGC TCACGCGGCG CATCGAGCAG GCGCGTGCCG CGCGGCCGCA GATGAAGATC
ATCGTGGCCG ACCCGCGCCG CACCGACACG GCCGGCATGG CCGACCTCTT CCTGCCGCTG
CGCCCGGGCA GCGACACCCT GCTGTTCCAC GGCATGCTGC ACATCATGGA ACTGGAAGGC
TGGCTGGACC AGGCCTACAT CGCACGCCAC ACCAGCGGCT TTGCCGACCT GCAGGCCCTG
GTGCGGGAGG CCACGCCCGA GCGCGTGGGC GAGCTCTGCG GCCTGCCCCG GCACGATCTG
TTCCAGGCCG CGCAATGGTT TGCGCTGGGC GGGGATGCAC GCGGCGGCGC CGCCCGTGGC
GCCACGCTGA GCCTGTACTG CCAGGGCCTG AACCAGAGCA GCAACGGCAC GGCCAAGAAC
GCCGCGCTGA TCGGCCTGCA CCTGGCCACG GGCCAGATCG GGCGCGCGGG CGCGGGGCCG
TTCTCGCTCA CGGGCCAGCC CAATGCCATG GGCGGGCGCG AGGTGGGCGG GCTGGCCAAT
CTGCTGTCGG CCCACCGCGA CCTGGCCAAC CCCGTCCACC GCGCCGAAGT GGCCGCACTG
TGGGGCGTGG ACGCCGTGCC GCACCGCCCC GGCAAGACCG CCGTGGAGAT GTTCGAGGCC
GCCGCCGAGG GCGAGATCCG CGCGCTTTGG ATAGCCTGCA CCAACCCTGC GCAAAGCATG
CCCGACCAGG CCCTGGTGCG GCGCGCGCTG CAGCGGGCCG AATTCGTCAT CGTGCAGGAG
GCCTTTGCCA CCACCGCCAC CTGCGCCTAC GCCGACCTGC TGCTGCCCGC CACCACCTGG
GGCGAGAAGC TCGGCACGGT GACCAACAGC GAAAGGCGCA TCTCGCGCGT GCGCCCCGCC
GTGGCCGCAC CCGGCGCCGC GCGCCATGAC TGGCGCATTG CCGTGGACTG CGCGCGGCGC
ATGGAGGCAC GGCTGCGCCC GGGCCGGCCC AGCCTCTTTC CCTACGACAC CGAAGACGCC
GCTGCCGGCG CCCAGGCCAT CTGGAACGAG CACCGCGAGA GCACGCGCGG GCGTGACCTG
GACATCACCG GCCTGTCCTG GGATCTGCTG GACGCGCAAG GCCCCCAGCA ATGGCCGCTG
CCCGAAGGCG CAGCCCAGGG CCGCGCACGG CTCTACGAAG ACGGCCGCTT TCCCACGCCC
GATGGCCGCG CACGCTTTGC CCTGCTGCCC TGGCAGCCGC TGGCCGAGCC GCCCGATGCG
CACTATCCCT TCAGCCTGAC CACAGGCCGG CTGCGCGACC AGTGGCACGG CATGAGCCGC
ACGGGCCAGC TGGGCCGCTT GTTCGGCCAT GCGGCCGAGC CCTGCCTGCA AATGCACCCG
CGGGACATGG CCGAGCGCGG CCTGCGCGCG GGCGACCTGG TGCAGATGAG CAGCCGGCGC
GGCGCCCTGC TGGTGCCGGT GCAGCCCGAT GACACGCTGA CGCCCTCCCA GCTCTTCATG
GCCATGCACT GGGGAGGCGA GTACCTGGGC GGCACCTCAA TGGGCGGCAC TTCAATGGGC
GGCGTCAATG CCCTGACCAC ACCGGCCTTG TGCCCCGGCT CCAAGCAGCC CGAACTCAAG
CACACGGCCG TGAAGCTGCA AAAGGCCGAA CTGCCCTGGA CCCTGCTGGC CATGGCCTGG
CTGCCCGAGG ACCGGGTGCT GGCCGTGCGC GAGCAGTTGT CCGCCCTCAT GCCGCACTTC
GGCTTTGCCA GCTGCGTGCC CTTCGGCAAT GCCGTCCCGC TGCAGGACGC CGCCCGGGCC
CGGCACGGCG TGCTGCTGCG CGCCGCCGCG CATGAGGCGC CGGGCGAGGC CGTCCTCGCA
CGGATCGAAT CCCTGCTGGG CCTGGATGCC GCCGACACCC TGCGCTACAC CGACCGCCGC
CGCCAGCACA GCCGCGCGCT GCGGCTGGAC CGCCACAGCC TGTCCACCAC GGTCGAGGCC
CTGCTGCTGG CGGGCGACAC GCGCGCGGGC AGCTGGCTGT CCACCCTGCT GCAGGACCAG
ATGCCGGCAC AGGACTATGG CCGCCTGCTG CTCATGCCCT CGGGTTCGGC GCCGCTGGCC
ATCCAGCCGC GTGCGCGCCA GGTCTGTACC TGCTTCGATG TGGACGAGAC CGCCATCGCA
GGCGCGCTTG CGCGCTGCGA GGGCAGCGAC GACGCGCGCC TGGCCGCGCT GCAGGGCCGG
TTGCGCTGCG GCACCAATTG CGGCTCCTGC CTGCCCGAGC TCAAGCGTCT GGTGCGCCAC
ATCCCCCTGG CGAAGAGCCA GGAGACCGCT GAAAGAGGCG ATTGA
 
Protein sequence
MQETRSTCPY CGVGCGVLIE SDGARITGVR GDPAHPANHG RLCTKGSTLH LTASPALAQQ 
TRRLQPALRA TRGAAPQDVG WDAALDLAAG RLASIVQEHG PDAVGLYVSG QLLTEDYYVF
NKLAKGLIGT NNIDTNSRLC MSSAVAGYKL TLGADAPPAC YEDVDHADCL FIAGSNAAWA
HPVLTRRIEQ ARAARPQMKI IVADPRRTDT AGMADLFLPL RPGSDTLLFH GMLHIMELEG
WLDQAYIARH TSGFADLQAL VREATPERVG ELCGLPRHDL FQAAQWFALG GDARGGAARG
ATLSLYCQGL NQSSNGTAKN AALIGLHLAT GQIGRAGAGP FSLTGQPNAM GGREVGGLAN
LLSAHRDLAN PVHRAEVAAL WGVDAVPHRP GKTAVEMFEA AAEGEIRALW IACTNPAQSM
PDQALVRRAL QRAEFVIVQE AFATTATCAY ADLLLPATTW GEKLGTVTNS ERRISRVRPA
VAAPGAARHD WRIAVDCARR MEARLRPGRP SLFPYDTEDA AAGAQAIWNE HRESTRGRDL
DITGLSWDLL DAQGPQQWPL PEGAAQGRAR LYEDGRFPTP DGRARFALLP WQPLAEPPDA
HYPFSLTTGR LRDQWHGMSR TGQLGRLFGH AAEPCLQMHP RDMAERGLRA GDLVQMSSRR
GALLVPVQPD DTLTPSQLFM AMHWGGEYLG GTSMGGTSMG GVNALTTPAL CPGSKQPELK
HTAVKLQKAE LPWTLLAMAW LPEDRVLAVR EQLSALMPHF GFASCVPFGN AVPLQDAARA
RHGVLLRAAA HEAPGEAVLA RIESLLGLDA ADTLRYTDRR RQHSRALRLD RHSLSTTVEA
LLLAGDTRAG SWLSTLLQDQ MPAQDYGRLL LMPSGSAPLA IQPRARQVCT CFDVDETAIA
GALARCEGSD DARLAALQGR LRCGTNCGSC LPELKRLVRH IPLAKSQETA ERGD