Gene Daci_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2361 
Symbol 
ID5747924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2602297 
End bp2603277 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID641297443 
ProductLysR family transcriptional regulator 
Protein accessionYP_001563384 
Protein GI160897802 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.990733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGT TGGCTGCGCC AGGGTTAAAT ACAATCGGCC AACTGTGGTT CCATTGTTTA 
CAGATCGTGA ATAAACAACC GGCTCCCGAA GACCTGCGTG TCTTCACCGT GGTGGCCCGC
AAATCCGGCT TTGCCGCTGC GGCCGAGGAA TTGGGTGCAT CGCCCGCCTA TGTGAGCAAG
CGCATCCGCC TGCTGGAGCA GGAGTTGGGC GTGAAGCTGC TGCACCGCAC CACGCGCCGC
GTGGCCGTGA CCGAGGAAGG CGAGCGCGTA TTCCACTGGG CGCAGCGCAT CCTCGACGAC
ATGGACCAGC TGATGCAGGA GGTGGCCATC ACGCGCAGCG AGCCGCGCGG CCTGCTGCGC
GTGAGCAGCA GCTTCGGCTT CGGGCGGCAT GTGATCGCGC CGGCGCTGTC CCGGCTGGTG
GAGCGCCATC CGGGGCTGCA GGTGCGGCTG GATGTGTTCG ACCGGCTGGT GGATGTGGCG
GGGGAGGGCT TCGATCTGGA TGTGCGCGTG GGCGACGAGA TCGCTCCCCA CCTGATTGCG
CGGCGGCTGG CCGACAACCA CCGCGTGCTG TGCGCGGCGC CTGCCTACCT GGCGCGCCGT
GGCACGCCGC GCACGCCGGC CGAGCTGTCG GCCCACGACT GCCTGGCCAT CAAGGAGCGC
GACCAGGCCT TTGGCGTGTG GCGGCTGCGC GCGGGCGCCG CCGAGCAATC GGTGAAGGTC
ACGGGGCCGC TGTCGGCCAA CAACGGGGAG ATGGTGGTGC AGTGGGCCGT GGACGGGCGC
GGCATCGCGC TGCGCTCGCT ATGGGATGTG GGCGCCCATC TGCAGGCCGG GCGCCTGGTG
CAGCTGCTGC CCGAATGGCG GCAGGAGGCC AATGTCTGGG CGGTCTATCC GACGCGGCTG
CAGCTGTCGG CCAAGGTGCG GGTGTGTGTC GAATTCCTGC AGGAGCACTT TCAGCAGGAA
TGGGCGGCAG CAGCGTCCTG A
 
Protein sequence
MALLAAPGLN TIGQLWFHCL QIVNKQPAPE DLRVFTVVAR KSGFAAAAEE LGASPAYVSK 
RIRLLEQELG VKLLHRTTRR VAVTEEGERV FHWAQRILDD MDQLMQEVAI TRSEPRGLLR
VSSSFGFGRH VIAPALSRLV ERHPGLQVRL DVFDRLVDVA GEGFDLDVRV GDEIAPHLIA
RRLADNHRVL CAAPAYLARR GTPRTPAELS AHDCLAIKER DQAFGVWRLR AGAAEQSVKV
TGPLSANNGE MVVQWAVDGR GIALRSLWDV GAHLQAGRLV QLLPEWRQEA NVWAVYPTRL
QLSAKVRVCV EFLQEHFQQE WAAAAS